RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 USP17L13C9JLJ4 530 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 USP17L11C9JVI0 530 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 USP17L18D6R9N7 530 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 USP17L22D6RA61 530 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 USP17L17D6RBQ6 530 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 USP17L19D6RCP7 530 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 USP17L20D6RJB6 530 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 PPP1R11O60927 126 aaPredicted RBP18.27■□□□□ 0.51
SSH3-201ENST00000308127 PDHBP11177 359 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 KLHL30Q0D2K2 578 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 USP17L24Q0WX57 530 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 ICE2Q659A1 982 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 USP17L6PQ6QN14 398 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 EFCAB13Q8IY85 973 aa18.27■□□□□ 0.51
SSH3-201ENST00000308127 BCCIPQ9P287 314 aaKnown RBP eCLIP18.27■□□□□ 0.51
SSH3-201ENST00000308127 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.27■□□□□ 0.51
SSH3-201ENST00000308127 AKR1B1P15121 316 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 SLC9A1P19634 815 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 EPS15P42566 896 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 EMBQ6PCB8 327 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 DPP8Q6V1X1 898 aaPredicted RBP18.26■□□□□ 0.51
SSH3-201ENST00000308127 TPTE2Q6XPS3 522 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 WDR66Q8TBY9 1149 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 DNAJC19Q96DA6 116 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 MYO1FO00160 1098 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 LCA5LO95447 670 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 CASP5P51878 434 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 SHROOM1Q2M3G4 852 aaPredicted RBP18.26■□□□□ 0.51
SSH3-201ENST00000308127 CEP85LQ5SZL2 805 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 NEDD1Q8NHV4 660 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 PIK3R5Q8WYR1 880 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 HAS1Q92839 578 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 DDX25Q9UHL0 483 aaKnown RBP18.26■□□□□ 0.51
SSH3-201ENST00000308127 ROBO1Q9Y6N7 1651 aa18.26■□□□□ 0.51
SSH3-201ENST00000308127 KRT18P05783 430 aaKnown RBP18.25■□□□□ 0.51
SSH3-201ENST00000308127 GJB7Q6PEY0 223 aa18.25■□□□□ 0.51
SSH3-201ENST00000308127 IFT20Q8IY31 132 aa18.25■□□□□ 0.51
SSH3-201ENST00000308127 A0A087WUV0 522 aaPredicted RBP18.25■□□□□ 0.51
SSH3-201ENST00000308127 GRID2IPA4D2P6 1211 aa18.25■□□□□ 0.51
SSH3-201ENST00000308127 UFL1O94874 794 aa18.25■□□□□ 0.51
SSH3-201ENST00000308127 LRRC63Q05C16 580 aa18.25■□□□□ 0.51
SSH3-201ENST00000308127 SLC10A5Q5PT55 438 aa18.25■□□□□ 0.51
SSH3-201ENST00000308127 ADAT2Q7Z6V5 191 aaKnown RBP18.25■□□□□ 0.51
SSH3-201ENST00000308127 PPANQ9NQ55 473 aaKnown RBP18.25■□□□□ 0.51
SSH3-201ENST00000308127 PVALEFA0A1B0GWK0 134 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 CEP104O60308 925 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 FKBP3Q00688 224 aaKnown RBP18.24■□□□□ 0.51
SSH3-201ENST00000308127 NAA35Q5VZE5 725 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 C16orf86Q6ZW13 317 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 GPBP1Q86WP2 473 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 MXD3Q9BW11 206 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 ATP6V0A2Q9Y487 856 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 CAPN7Q9Y6W3 813 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 POTEFA5A3E0 1075 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 FAM196BA6NMK8 535 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 MPHOSPH10O00566 681 aaKnown RBP18.24■□□□□ 0.51
SSH3-201ENST00000308127 PJA2O43164 708 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 POTEIP0CG38 1075 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 INPP5BP32019 993 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 DCAF17Q5H9S7 520 aaPredicted RBP18.24■□□□□ 0.51
SSH3-201ENST00000308127 MFSD14BQ5SR56 506 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 RNF187Q5TA31 235 aaPredicted RBP18.24■□□□□ 0.51
SSH3-201ENST00000308127 POTEGQ6S5H5 508 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 POTEEQ6S8J3 1075 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 TRIM31Q9BZY9 425 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 DDX47Q9H0S4 455 aaKnown RBP18.24■□□□□ 0.51
SSH3-201ENST00000308127 LRRC4CQ9HCJ2 640 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 STK17AQ9UEE5 414 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 PLAAQ9Y263 795 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 TMCO5BA8MYB1 307 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 USP17L10C9JJH3 530 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 SERPING1P05155 500 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 PRLRP16471 622 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 GPSM2P81274 684 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 PTK2Q05397 1052 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 TCERG1LQ5VWI1 586 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 EFCC1Q9HA90 598 aa18.24■□□□□ 0.51
SSH3-201ENST00000308127 IRS2Q9Y4H2 1338 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 FLT3P36888 993 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 FXR2P51116 673 aaKnown RBP eCLIP18.23■□□□□ 0.51
SSH3-201ENST00000308127 ADAM9Q13443 819 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 IPO4Q8TEX9 1081 aaKnown RBP18.23■□□□□ 0.51
SSH3-201ENST00000308127 LZTS2Q9BRK4 669 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 NEUROG2Q9H2A3 272 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 CEP72Q9P209 647 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 PCDHA12Q9UN75 941 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 BCS1LQ9Y276 419 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 FGFR1OPO95684 399 aaKnown RBP18.23■□□□□ 0.51
SSH3-201ENST00000308127 ITGA4P13612 1032 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 ERVK-9P63128 1117 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 HDLBPQ00341 1268 aaKnown RBP18.23■□□□□ 0.51
SSH3-201ENST00000308127 ZNF572Q7Z3I7 529 aaPredicted RBP18.23■□□□□ 0.51
SSH3-201ENST00000308127 ADGRF4Q8IZF3 695 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 IQCKQ8N0W5 287 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 SCFD1Q8WVM8 642 aa18.23■□□□□ 0.51
SSH3-201ENST00000308127 RTCBQ9Y3I0 505 aaKnown RBP18.23■□□□□ 0.51
SSH3-201ENST00000308127 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
SSH3-201ENST00000308127 NR1D1P20393 614 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 LSP1P33241 339 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms