RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ZNF287Q9HBT7 754 aa17.63■□□□□ 0.41
MAP1LC3B-201ENST00000268607 BARHL2Q9NY43 387 aa17.63■□□□□ 0.41
MAP1LC3B-201ENST00000268607 RWDD2AQ9UIY3 292 aa17.63■□□□□ 0.41
MAP1LC3B-201ENST00000268607 NAV1Q8NEY1 1877 aa17.63■□□□□ 0.41
MAP1LC3B-201ENST00000268607 MEFVO15553 781 aaPredicted RBP17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 KRT86O43790 486 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 JAG1P78504 1218 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 DLK2Q6UY11 383 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 RASSF8Q8NHQ8 419 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 PIGSQ96S52 555 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 GMLQ99445 158 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CENPHQ9H3R5 247 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SERPINA10Q9UK55 444 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 MATR3P43243 847 aaKnown RBP eCLIP17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 TRAPPC10P48553 1259 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 ATP1A2P50993 1020 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CIAPIN1Q6FI81 312 aa17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 TSEN2Q8NCE0 465 aaKnown RBP17.62■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SHMT1P34896 483 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 TSR1Q2NL82 804 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CCDC84Q86UT8 332 aaPredicted RBP17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 DNAJC7Q99615 494 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 KLC4Q9NSK0 619 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 DDX60LQ5H9U9 1706 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 M0R2N6 131 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 OPA1O60313 960 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 ZEB2O60315 1214 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 GCFC2P16383 781 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 KRT83P78385 493 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 RRP1BQ14684 758 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CCDC178Q5BJE1 867 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 KCTD16Q68DU8 428 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CCDC70Q6NSX1 233 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 B4GALNT4Q76KP1 1039 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SH2D3CQ8N5H7 860 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 EHBP1Q8NDI1 1231 aa17.61■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SMCO2A6NFE2 343 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 LETM2Q2VYF4 491 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 MB21D1Q8N884 522 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CSRNP1Q96S65 589 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SH3GLB2Q9NR46 395 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 GDAQ9Y2T3 454 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CENPFP49454 3210 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 ZNF541Q9H0D2 1346 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 FRMD3A2A2Y4 597 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 TRIM49BA6NDI0 452 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 WNT10BO00744 389 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CYP27A1Q02318 531 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 GABPAQ06546 454 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 BIRC2Q13490 618 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 PDXDC2PQ6P474 469 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CEP57Q86XR8 500 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 RUFY1Q96T51 708 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SYT17Q9BSW7 474 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 GPCPD1Q9NPB8 672 aa17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 BIN2Q9UBW5 565 aaPredicted RBP17.6■□□□□ 0.41
MAP1LC3B-201ENST00000268607 IQCEQ6IPM2 695 aa17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 DTHD1Q6ZMT9 781 aa17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 IRF2BP1Q8IU81 584 aa17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 KIF13BQ9NQT8 1826 aa17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 GMPSP49915 693 aaPredicted RBP17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CREG2Q8IUH2 290 aa17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 KIRREL3Q8IZU9 778 aa17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 COA7Q96BR5 231 aa17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 AGPAT5Q9NUQ2 364 aa17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 TMEM260Q9NX78 707 aa17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CCNT1O60563 726 aaKnown RBP17.58■□□□□ 0.41
MAP1LC3B-201ENST00000268607 STAT6P42226 847 aa17.58■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SKOR1P84550 965 aa17.58■□□□□ 0.41
MAP1LC3B-201ENST00000268607 SMARCAL1Q9NZC9 954 aa17.58■□□□□ 0.41
MAP1LC3B-201ENST00000268607 CAPN11Q9UMQ6 739 aa17.58■□□□□ 0.41
MAP1LC3B-201ENST00000268607 ANO9A1A5B4 782 aa17.58■□□□□ 0.4
MAP1LC3B-201ENST00000268607 PRCPP42785 496 aa17.58■□□□□ 0.4
MAP1LC3B-201ENST00000268607 RNF187Q5TA31 235 aaPredicted RBP17.58■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MMGT1Q8N4V1 131 aa17.58■□□□□ 0.4
MAP1LC3B-201ENST00000268607 PSMB7Q99436 277 aa17.58■□□□□ 0.4
MAP1LC3B-201ENST00000268607 NHEJ1Q9H9Q4 299 aaPredicted RBP17.58■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SEC63Q9UGP8 760 aaKnown RBP17.58■□□□□ 0.4
MAP1LC3B-201ENST00000268607 HSF2BPO75031 334 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 KRT14P02533 472 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 HLA-DOAP06340 250 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CEP85LQ5SZL2 805 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 WLSQ5T9L3 541 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MICALL2Q8IY33 904 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MYOZ2Q9NPC6 264 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MTMR4Q9NYA4 1195 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 EPB41P11171 864 aaKnown RBP17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 PDHBP11177 359 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 YBX3P16989 372 aaKnown RBP eCLIP17.57■□□□□ 0.41e-7■■□□□ 13.9
MAP1LC3B-201ENST00000268607 CYLC1P35663 651 aaPredicted RBP17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MAP2K1Q02750 393 aaPredicted RBP17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CCDC40Q4G0X9 1142 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SOGA3Q5TF21 947 aa17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ARL6IP4Q66PJ3 421 aaKnown RBP17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SPZ1Q9BXG8 430 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms