RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 KIAA0895Q8NCT3 520 aa20.89■□□□□ 0.93
SNX4-201ENST00000251775 JMJD4Q9H9V9 463 aa20.89■□□□□ 0.93
SNX4-201ENST00000251775 HNRNPH3P31942 346 aaKnown RBP20.88■□□□□ 0.93
SNX4-201ENST00000251775 SCNN1DP51172 638 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 AMPD3Q01432 767 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 TTBK2Q6IQ55 1244 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 TMC4Q7Z404 712 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 ZSCAN29Q8IWY8 852 aaPredicted RBP20.88■□□□□ 0.93
SNX4-201ENST00000251775 OTUD6BQ8N6M0 293 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 USP40Q9NVE5 1235 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 SERPINB13Q9UIV8 391 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 PLAGL2Q9UPG8 496 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 MYH4Q9Y623 1939 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 BICDL2A1A5D9 508 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 PPP1R11O60927 126 aaPredicted RBP20.88■□□□□ 0.93
SNX4-201ENST00000251775 TTLL1O95922 423 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 ZNF543Q08ER8 600 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 DOK7Q18PE1 504 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 FKBP15Q5T1M5 1219 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 CCDC181Q5TID7 509 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 C8orf74Q6P047 294 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 RNPC3Q96LT9 517 aaKnown RBP20.88■□□□□ 0.93
SNX4-201ENST00000251775 NOC4LQ9BVI4 516 aaKnown RBP20.88■□□□□ 0.93
SNX4-201ENST00000251775 POLD4Q9HCU8 107 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 RBM12Q9NTZ6 932 aaKnown RBP20.88■□□□□ 0.93
SNX4-201ENST00000251775 TRPC5Q9UL62 973 aaPredicted RBP20.88■□□□□ 0.93
SNX4-201ENST00000251775 SUGT1Q9Y2Z0 365 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 EP400Q96L91 3159 aa20.88■□□□□ 0.93
SNX4-201ENST00000251775 NCK2O43639 380 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 ZEB2O60315 1214 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 KIAA0754O94854 1291 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 SLURP2P0DP57 97 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 SHMT1P34896 483 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 MTIF2P46199 727 aaKnown RBP20.87■□□□□ 0.93
SNX4-201ENST00000251775 FXR2P51116 673 aaKnown RBP eCLIP20.87■□□□□ 0.93
SNX4-201ENST00000251775 KIF11P52732 1056 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 KDM7AQ6ZMT4 941 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 SPATS2Q86XZ4 545 aaKnown RBP20.87■□□□□ 0.93
SNX4-201ENST00000251775 ADGRF4Q8IZF3 695 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 IQCKQ8N0W5 287 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 ZC3H12CQ9C0D7 883 aaKnown RBP20.87■□□□□ 0.93
SNX4-201ENST00000251775 LSP1P33241 339 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 MAP2K2P36507 400 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 CABS1Q96KC9 395 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 PAGR1Q9BTK6 254 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 CXorf56Q9H5V9 222 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 MYH7BA7E2Y1 1941 aa20.87■□□□□ 0.93
SNX4-201ENST00000251775 POTEMA6NI47 508 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 MYMKA6NI61 221 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 ZNF233A6NK53 670 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 TRIM37O94972 964 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 LCA5LO95447 670 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 UBE2SQ16763 222 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 NAA35Q5VZE5 725 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 SV2BQ7L1I2 683 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 C2CD5Q86YS7 1000 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 NUDT12Q9BQG2 462 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 SEMA6BQ9H3T3 888 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 SLC39A2Q9NP94 309 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 SALL4Q9UJQ4 1053 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 NAP1L1P55209 391 aaKnown RBP20.86■□□□□ 0.93
SNX4-201ENST00000251775 CNNM4Q6P4Q7 775 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 CCDC43Q96MW1 224 aaKnown RBP20.86■□□□□ 0.93
SNX4-201ENST00000251775 ALS2CR12Q96Q35 445 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 EPN3Q9H201 632 aa20.86■□□□□ 0.93
SNX4-201ENST00000251775 GREB1LQ9C091 1923 aaPredicted RBP20.86■□□□□ 0.93
SNX4-201ENST00000251775 PNMA6FA0A0J9YX94 578 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 EPHB6O15197 1021 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 FAM153BP0C7A2 387 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 EIF4A3P38919 411 aaKnown RBP20.85■□□□□ 0.93
SNX4-201ENST00000251775 PAFAH1B1P43034 410 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 GUCY1A3Q02108 690 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 FAM153CQ494X1 144 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 EMC10Q5UCC4 262 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 CDC42EP5Q6NZY7 148 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 FAM114A1Q8IWE2 563 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 PROM2Q8N271 834 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 TLR10Q9BXR5 811 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 RIC8AQ9NPQ8 531 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 SWAP70Q9UH65 585 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 FAM153AQ9UHL3 310 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 H0YHG0 523 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 GLI1P08151 1106 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 SLC16A2P36021 539 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 TNNI2P48788 182 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 CARSP49589 748 aaKnown RBP20.85■□□□□ 0.93
SNX4-201ENST00000251775 COBLL1Q53SF7 1204 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 LARP4BQ92615 738 aaKnown RBP20.85■□□□□ 0.93
SNX4-201ENST00000251775 GDF3Q9NR23 364 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 STK17AQ9UEE5 414 aa20.85■□□□□ 0.93
SNX4-201ENST00000251775 PPP1R2P41236 205 aa20.84■□□□□ 0.93
SNX4-201ENST00000251775 TMEM266Q2M3C6 531 aa20.84■□□□□ 0.93
SNX4-201ENST00000251775 GLE1Q53GS7 698 aaKnown RBP20.84■□□□□ 0.93
SNX4-201ENST00000251775 DYMQ7RTS9 669 aa20.84■□□□□ 0.93
SNX4-201ENST00000251775 PIK3R5Q8WYR1 880 aa20.84■□□□□ 0.93
SNX4-201ENST00000251775 NFU1Q9UMS0 254 aa20.84■□□□□ 0.93
SNX4-201ENST00000251775 CLK2P49760 499 aaKnown RBP20.84■□□□□ 0.93
SNX4-201ENST00000251775 APBA1Q02410 837 aa20.84■□□□□ 0.93
SNX4-201ENST00000251775 CFAP58Q5T655 872 aa20.84■□□□□ 0.93
SNX4-201ENST00000251775 CENPPQ6IPU0 288 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms