RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 SCTRP47872 440 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 C3orf67Q6ZVT6 689 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 TMTC3Q6ZXV5 915 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 TRAPPC11Q7Z392 1133 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 EGFL6Q8IUX8 553 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 ZNF34Q8IZ26 560 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 FAM84BQ96KN1 310 aaPredicted RBP14.53□□□□□ -0.08
CCDC117-201ENST00000249064 NUP58Q9BVL2 599 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 SMCO2A6NFE2 343 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 GTPBP6O43824 516 aaPredicted RBP14.53□□□□□ -0.08
CCDC117-201ENST00000249064 POLR2FP61218 127 aaKnown RBP14.53□□□□□ -0.08
CCDC117-201ENST00000249064 ITPK1Q13572 414 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 LRRC41Q15345 812 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 PPFIBP2Q8ND30 876 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 CUL5Q93034 780 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 ARPP21Q9UBL0 812 aaPredicted RBP14.53□□□□□ -0.08
CCDC117-201ENST00000249064 TBK1Q9UHD2 729 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 ADAMTS1Q9UHI8 967 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 SNX12Q9UMY4 172 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 WDR19Q8NEZ3 1342 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 TTMPQ5BVD1 217 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 HOOK3Q86VS8 718 aa14.53□□□□□ -0.08
CCDC117-201ENST00000249064 BICDL2A1A5D9 508 aa14.52□□□□□ -0.08
CCDC117-201ENST00000249064 TARSL2A2RTX5 802 aaKnown RBP14.52□□□□□ -0.08
CCDC117-201ENST00000249064 PREPLQ4J6C6 727 aaPredicted RBP14.52□□□□□ -0.08
CCDC117-201ENST00000249064 DCAF17Q5H9S7 520 aaPredicted RBP14.52□□□□□ -0.08
CCDC117-201ENST00000249064 CAPN12Q6ZSI9 719 aa14.52□□□□□ -0.08
CCDC117-201ENST00000249064 LRRC47Q8N1G4 583 aaKnown RBP14.52□□□□□ -0.08
CCDC117-201ENST00000249064 TAOK3Q9H2K8 898 aa14.52□□□□□ -0.08
CCDC117-201ENST00000249064 DCP1AQ9NPI6 582 aaPredicted RBP14.52□□□□□ -0.08
CCDC117-201ENST00000249064 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.52□□□□□ -0.082e-6■■■■■ 149.1
CCDC117-201ENST00000249064 PALMO75781 387 aa14.52□□□□□ -0.08
CCDC117-201ENST00000249064 STX2P32856 288 aa14.52□□□□□ -0.08
CCDC117-201ENST00000249064 RETREG2Q8NC44 543 aa14.52□□□□□ -0.08
CCDC117-201ENST00000249064 TBC1D5Q92609 795 aa14.52□□□□□ -0.08
CCDC117-201ENST00000249064 STMN2Q93045 179 aa14.52□□□□□ -0.08
CCDC117-201ENST00000249064 FBXL5Q9UKA1 691 aa14.52□□□□□ -0.08
CCDC117-201ENST00000249064 TXNDC9O14530 226 aa14.52□□□□□ -0.09
CCDC117-201ENST00000249064 PPP2R2AP63151 447 aa14.52□□□□□ -0.09
CCDC117-201ENST00000249064 NKX1-1Q15270 411 aaPredicted RBP14.52□□□□□ -0.09
CCDC117-201ENST00000249064 TMEM266Q2M3C6 531 aa14.52□□□□□ -0.09
CCDC117-201ENST00000249064 NBPF9Q3BBW0 867 aa14.52□□□□□ -0.09
CCDC117-201ENST00000249064 VGLL2Q8N8G2 317 aa14.52□□□□□ -0.09
CCDC117-201ENST00000249064 C6orf50Q9HD87 102 aa14.52□□□□□ -0.09
CCDC117-201ENST00000249064 CAPN6Q9Y6Q1 641 aa14.52□□□□□ -0.09
CCDC117-201ENST00000249064 MST1RQ04912 1400 aa14.52□□□□□ -0.09
CCDC117-201ENST00000249064 STK36Q9NRP7 1315 aa14.52□□□□□ -0.09
CCDC117-201ENST00000249064 UFL1O94874 794 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 TRIM37O94972 964 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
CCDC117-201ENST00000249064 SLC17A8Q8NDX2 589 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 KLHL14Q9P2G3 628 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 GNAQP50148 359 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 AMPD3Q01432 767 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 UBXN6Q9BZV1 441 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 NKIRAS1Q9NYS0 192 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 RTCBQ9Y3I0 505 aaKnown RBP14.51□□□□□ -0.09
CCDC117-201ENST00000249064 KDM3BQ7LBC6 1761 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 TBX2Q13207 712 aaPredicted RBP14.51□□□□□ -0.09
CCDC117-201ENST00000249064 CEP128Q6ZU80 1094 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 PNMA2Q9UL42 364 aa14.51□□□□□ -0.09
CCDC117-201ENST00000249064 RNF225M0QZC1 329 aaPredicted RBP14.5□□□□□ -0.09
CCDC117-201ENST00000249064 LDHCP07864 332 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 GJC1P36383 396 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 GSCP56915 257 aaPredicted RBP14.5□□□□□ -0.09
CCDC117-201ENST00000249064 RWDD2BP57060 319 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 ZBED6P86452 979 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 TBC1D9BQ66K14 1250 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 RFX8Q6ZV50 586 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 ZNF804BA4D1E1 1349 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 LUC7L3O95232 432 aaKnown RBP14.5□□□□□ -0.09
CCDC117-201ENST00000249064 BAG2O95816 211 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 GNAT1P11488 350 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 FGFR2P21802 821 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 CTCFP49711 727 aaPredicted RBP14.5□□□□□ -0.09
CCDC117-201ENST00000249064 EAPPQ56P03 285 aaPredicted RBP14.5□□□□□ -0.09
CCDC117-201ENST00000249064 PRCCQ92733 491 aaPredicted RBP14.5□□□□□ -0.09
CCDC117-201ENST00000249064 COA7Q96BR5 231 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 EYA3Q99504 573 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 PTPN22Q9Y2R2 807 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 DAPK3O43293 454 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 PRPF6O94906 941 aaKnown RBP14.5□□□□□ -0.09
CCDC117-201ENST00000249064 GLI1P08151 1106 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 MSH2P43246 934 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 SFMBT2Q5VUG0 894 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 SH3RF3Q8TEJ3 882 aaPredicted RBP14.5□□□□□ -0.09
CCDC117-201ENST00000249064 CHMP6Q96FZ7 201 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 ZNF287Q9HBT7 754 aa14.5□□□□□ -0.09
CCDC117-201ENST00000249064 MTRF1LQ9UGC7 380 aaKnown RBP14.5□□□□□ -0.09
CCDC117-201ENST00000249064 SPDYE3A6NKU9 549 aa14.49□□□□□ -0.09
CCDC117-201ENST00000249064 CPP00450 1065 aa14.49□□□□□ -0.09
CCDC117-201ENST00000249064 AARSP49588 968 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCDC117-201ENST00000249064 RAD23BP54727 409 aa14.49□□□□□ -0.09
CCDC117-201ENST00000249064 PYM1Q9BRP8 204 aaKnown RBP14.49□□□□□ -0.09
CCDC117-201ENST00000249064 HSD3B7Q9H2F3 369 aa14.49□□□□□ -0.09
CCDC117-201ENST00000249064 ECT2Q9H8V3 914 aa14.49□□□□□ -0.09
CCDC117-201ENST00000249064 ETNK1Q9HBU6 452 aa14.49□□□□□ -0.09
CCDC117-201ENST00000249064 MED1Q15648 1581 aaPredicted RBP14.49□□□□□ -0.09
CCDC117-201ENST00000249064 SUN1O94901 812 aa14.49□□□□□ -0.09
CCDC117-201ENST00000249064 PLCG1P19174 1290 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms