RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 RBM43Q6ZSC3 357 aaKnown RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 UHMK1Q8TAS1 419 aaKnown RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 PAGE5Q96GU1 130 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 RSRC1Q96IZ7 334 aaKnown RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 ZNF512BQ96KM6 892 aaPredicted RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 KRT12Q99456 494 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 NEDD4P46934 1319 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 STAM2O75886 525 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 USP14P54578 494 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 GNGT1P63211 74 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 IGBP1P78318 339 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 SYDE2Q5VT97 1194 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 TMTC3Q6ZXV5 915 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 SLC17A8Q8NDX2 589 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 CEP170P1Q96L14 293 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 LY9Q9HBG7 655 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 CPDO75976 1380 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 COL15A1P39059 1388 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 MAN1A1P33908 653 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 ATP1A2P50993 1020 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 RCAN1P53805 252 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 UBE2SQ16763 222 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 TBC1D10BQ4KMP7 808 aaPredicted RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 VSTM4Q8IW00 320 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 MAGOHBQ96A72 148 aaKnown RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 MED4Q9NPJ6 270 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 PNMA6FA0A0J9YX94 578 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 MMP10P09238 476 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 SLC12A2P55011 1212 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 NKX1-1Q15270 411 aaPredicted RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 CDHR1Q96JP9 859 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 INO80B-WBP1J3KQ70 363 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 LRRN2O75325 713 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 PLA2G4BP0C869 781 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 TPD52P55327 224 aaPredicted RBP12.53□□□□□ -0.4
NOD1-201ENST00000222823 BFSP1Q12934 665 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 SUPT20HL1Q3ZLR7 823 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 TRIM50Q86XT4 487 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 ACCSQ96QU6 501 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 INO80BQ9C086 356 aaPredicted RBP12.53□□□□□ -0.4
NOD1-201ENST00000222823 NPR1P16066 1061 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 CDC37Q16543 378 aaPredicted RBP12.53□□□□□ -0.4
NOD1-201ENST00000222823 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 AFAP1L2Q8N4X5 818 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 HAUS1Q96CS2 278 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
NOD1-201ENST00000222823 KMT5AQ9NQR1 393 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 TYW1Q9NV66 732 aaKnown RBP12.53□□□□□ -0.4
NOD1-201ENST00000222823 ADD3Q9UEY8 706 aaKnown RBP12.53□□□□□ -0.4
NOD1-201ENST00000222823 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 THAP12O43422 761 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 FDPSP14324 419 aaKnown RBP12.53□□□□□ -0.4
NOD1-201ENST00000222823 CDC27P30260 824 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 CASP7P55210 303 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 PSMD2Q13200 908 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 SEPT2Q15019 361 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 ARHGAP24Q8N264 748 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 BCAS4Q8TDM0 211 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 PARVGQ9HBI0 331 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 DISC1Q9NRI5 854 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 PHLPP2Q6ZVD8 1323 aa12.53□□□□□ -0.4
NOD1-201ENST00000222823 PIK3CAP42336 1068 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 CCDC93Q567U6 631 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 CAPN12Q6ZSI9 719 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 ANO3Q9BYT9 981 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 TMEM206Q9H813 350 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 PFDN4Q9NQP4 134 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 FMN2Q9NZ56 1722 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 KIF28PB7ZC32 967 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 GOLGA8KD6RF30 607 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 PHBP35232 272 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 PPP2R5CQ13362 524 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 KMT5BQ4FZB7 885 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 CACNA2D3Q8IZS8 1091 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 ACRBPQ8NEB7 543 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 NDST4Q9H3R1 872 aa12.52□□□□□ -0.4
NOD1-201ENST00000222823 CYP2D6P10635 497 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 TFDP1Q14186 410 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 CCDC170Q8IYT3 715 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
NOD1-201ENST00000222823 DDX23Q9BUQ8 820 aaKnown RBP12.52□□□□□ -0.41
NOD1-201ENST00000222823 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 BHMT2Q9H2M3 363 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 PCIF1Q9H4Z3 704 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 PASKQ96RG2 1323 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 PCK1P35558 622 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 CCNA1P78396 465 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 CYP27A1Q02318 531 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 ENGASEQ8NFI3 743 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.41
NOD1-201ENST00000222823 MED10Q9BTT4 135 aa12.52□□□□□ -0.41
NOD1-201ENST00000222823 THAP9Q9H5L6 903 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms