RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CCDC174Q6PII3 467 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 SASS6Q6UVJ0 657 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 KCNJ14Q9UNX9 436 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 SRPRBQ9Y5M8 271 aaKnown RBP19.52■□□□□ 0.72
PHGDH-234ENST00000642041 CLIC4Q9Y696 253 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 SMCHD1A6NHR9 2005 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 SYCE3A1L190 88 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 TIMP1P01033 207 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 ADORA2AP29274 412 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 SLC1A4P43007 532 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 TFF2Q03403 129 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 PTPAQ15257 358 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 RAB30Q15771 203 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 TMEM240Q5SV17 173 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 PRAMEF19Q5SWL8 479 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 ANKRD33Q7Z3H0 272 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 CMTR1Q8N1G2 835 aaKnown RBP19.51■□□□□ 0.71
PHGDH-234ENST00000642041 STAG2Q8N3U4 1231 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 FSIP1Q8NA03 581 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 MSRAQ9UJ68 235 aa19.51■□□□□ 0.71
PHGDH-234ENST00000642041 PPFIA3O75145 1194 aa19.5■□□□□ 0.71
PHGDH-234ENST00000642041 EEF2P13639 858 aaKnown RBP19.5■□□□□ 0.71
PHGDH-234ENST00000642041 KCNQ1P51787 676 aa19.5■□□□□ 0.71
PHGDH-234ENST00000642041 NAPAP54920 295 aa19.5■□□□□ 0.71
PHGDH-234ENST00000642041 PPIGQ13427 754 aaKnown RBP eCLIP19.5■□□□□ 0.716e-8■□□□□ 10.1
PHGDH-234ENST00000642041 SLFN13Q68D06 897 aa19.5■□□□□ 0.71
PHGDH-234ENST00000642041 C16orf59Q7L2K0 433 aa19.5■□□□□ 0.71
PHGDH-234ENST00000642041 CHURC1Q8WUH1 139 aa19.5■□□□□ 0.71
PHGDH-234ENST00000642041 ZNF236Q9UL36 1845 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 A0A1W2PQ45 241 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-234ENST00000642041 A0A1W2PQY0 241 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 DCDC2CA8MYV0 355 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 ZBTB5O15062 677 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 MFSD5Q6N075 450 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 BTNL9Q6UXG8 535 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 HEATR3Q7Z4Q2 680 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 RNF180Q86T96 592 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 CLEC10AQ8IUN9 316 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 LRRC47Q8N1G4 583 aaKnown RBP19.49■□□□□ 0.71
PHGDH-234ENST00000642041 ENGASEQ8NFI3 743 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 TNFRSF25Q93038 417 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 MTMR8Q96EF0 704 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 CHAMP1Q96JM3 812 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 SDF4Q9BRK5 362 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 NAT10Q9H0A0 1025 aaKnown RBP19.49■□□□□ 0.71
PHGDH-234ENST00000642041 XPNPEP3Q9NQH7 507 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 SLC5A4Q9NY91 659 aa19.49■□□□□ 0.71
PHGDH-234ENST00000642041 STXBP3O00186 592 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 COBLO75128 1261 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 FDX1P10109 184 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 RARBP10826 455 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 USP14P54578 494 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 SEMA3FQ13275 785 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 CCDC96Q2M329 555 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 TTC38Q5R3I4 469 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 FAM160B2Q86V87 743 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 FEZ1Q99689 392 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 C11orf16Q9NQ32 467 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 TMX2Q9Y320 296 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 MYH4Q9Y623 1939 aa19.48■□□□□ 0.71
PHGDH-234ENST00000642041 SMCO2A6NFE2 343 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 SPDYE16A6NNV3 312 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-234ENST00000642041 F5H6K3 240 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 CYTH3O43739 400 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 PRPHP41219 470 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 SYKP43405 635 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 KLRC3Q07444 240 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 NONOQ15233 471 aaKnown RBP eCLIP19.47■□□□□ 0.71
PHGDH-234ENST00000642041 ZYXQ15942 572 aaKnown RBP19.47■□□□□ 0.71
PHGDH-234ENST00000642041 AXDND1Q5T1B0 1012 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-234ENST00000642041 RESP18Q5W5W9 173 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 FMR1NBQ8N0W7 255 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-234ENST00000642041 HERVK_113Q902F9 699 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 SLC28A3Q9HAS3 691 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 GJB4Q9NTQ9 266 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 NRBP1Q9UHY1 535 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 TBX21Q9UL17 535 aa19.47■□□□□ 0.71
PHGDH-234ENST00000642041 BMP3P12645 472 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 LIG1P18858 919 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 VCAM1P19320 739 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 TXLNAP40222 546 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 NR5A1Q13285 461 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 WWC2Q6AWC2 1192 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 SAMD3Q8N6K7 520 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 SHCBP1Q8NEM2 672 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 MOV10L1Q9BXT6 1211 aaKnown RBP19.46■□□□□ 0.71
PHGDH-234ENST00000642041 NKX2-4Q9H2Z4 354 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 TRANK1O15050 2925 aa19.46■□□□□ 0.71
PHGDH-234ENST00000642041 DTNBO60941 627 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 NR1I2O75469 434 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 PGK1P00558 417 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 FOSP01100 380 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-234ENST00000642041 LONP1P36776 959 aaKnown RBP19.45■□□□□ 0.7
PHGDH-234ENST00000642041 TOB1P50616 345 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-234ENST00000642041 ADCY7P51828 1080 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 ATP2C1P98194 919 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-234ENST00000642041 CCDC173Q0VFZ6 552 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 SNW1Q13573 536 aaKnown RBP19.45■□□□□ 0.7
PHGDH-234ENST00000642041 PSRC1Q6PGN9 363 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-234ENST00000642041 ZNF365Q70YC5 407 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms