RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 MYOCDQ8IZQ8 938 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 ANKS1AQ92625 1134 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 SIK3Q9Y2K2 1263 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 ATP1A2P50993 1020 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 TBC1D5Q92609 795 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 PANK4Q9NVE7 773 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 PCDHA12Q9UN75 941 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 MYH10P35580 1976 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 ANO9A1A5B4 782 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 MEIS1O00470 390 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 STAT3P40763 770 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 EHHADHQ08426 723 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 RAD54LQ92698 747 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 RPGRIP1Q96KN7 1286 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 MAGEF1Q9HAY2 307 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 HYOU1Q9Y4L1 999 aa16.14■□□□□ 0.17
SCARB2-221ENST00000640341 TCERG1LQ5VWI1 586 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 BMP2KQ9NSY1 1161 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-221ENST00000640341 GGA1Q9UJY5 639 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 LEMD3Q9Y2U8 911 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 FGFR1OPO95684 399 aaKnown RBP16.13■□□□□ 0.17
SCARB2-221ENST00000640341 COASYQ13057 564 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 IKQ13123 557 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-221ENST00000640341 FAM26FQ5R3K3 315 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-221ENST00000640341 KLHL7Q8IXQ5 586 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 SH2D3CQ8N5H7 860 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 NOX5Q96PH1 765 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 FAM184BQ9ULE4 1060 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 A0A1B0GUL6 1792 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 POTEB3A0JP26 581 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 POTECB2RU33 542 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 USP17L10C9JJH3 530 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 AGPSO00116 658 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 ZEB2O60315 1214 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 CCT5P48643 541 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 POTEBQ6S5H4 581 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.13■□□□□ 0.17
SCARB2-221ENST00000640341 NHSL1Q5SYE7 1610 aa16.13■□□□□ 0.17
SCARB2-221ENST00000640341 PALMO75781 387 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 NOP2P46087 812 aaKnown RBP16.12■□□□□ 0.17
SCARB2-221ENST00000640341 CACNB3P54284 484 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 GUCY2DQ02846 1103 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 ADGRF4Q8IZF3 695 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 PACSIN1Q9BY11 444 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 NFU1Q9UMS0 254 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 KRT14P02533 472 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 TAL1P17542 331 aaPredicted RBP16.12■□□□□ 0.17
SCARB2-221ENST00000640341 TCP10Q12799 353 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 KIAA0753Q2KHM9 967 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 SLC9C1Q4G0N8 1177 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
SCARB2-221ENST00000640341 GUF1Q8N442 669 aaKnown RBP16.12■□□□□ 0.17
SCARB2-221ENST00000640341 MTMR9Q96QG7 549 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 ACTN1P12814 892 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 PPP4CP60510 307 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 SFMBT2Q5VUG0 894 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 TSEN2Q8NCE0 465 aaKnown RBP16.12■□□□□ 0.17
SCARB2-221ENST00000640341 EPB41L5Q9HCM4 733 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 MTMR4Q9NYA4 1195 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 SAMM50Q9Y512 469 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 COL4A3BPQ9Y5P4 624 aa16.12■□□□□ 0.17
SCARB2-221ENST00000640341 TARSL2A2RTX5 802 aaKnown RBP16.11■□□□□ 0.17
SCARB2-221ENST00000640341 PRPF6O94906 941 aaKnown RBP16.11■□□□□ 0.17
SCARB2-221ENST00000640341 DCAF17Q5H9S7 520 aaPredicted RBP16.11■□□□□ 0.17
SCARB2-221ENST00000640341 GPBP1Q86WP2 473 aa16.11■□□□□ 0.17
SCARB2-221ENST00000640341 UBAP1LF5GYI3 381 aa16.11■□□□□ 0.17
SCARB2-221ENST00000640341 TCP1P17987 556 aaKnown RBP16.11■□□□□ 0.17
SCARB2-221ENST00000640341 FKBP3Q00688 224 aaKnown RBP16.11■□□□□ 0.17
SCARB2-221ENST00000640341 KCNMA1Q12791 1236 aa16.11■□□□□ 0.17
SCARB2-221ENST00000640341 LRRC55Q6ZSA7 311 aa16.11■□□□□ 0.17
SCARB2-221ENST00000640341 KRT12Q99456 494 aa16.11■□□□□ 0.17
SCARB2-221ENST00000640341 FAM107BQ9H098 131 aa16.11■□□□□ 0.17
SCARB2-221ENST00000640341 PSTPIP2Q9H939 334 aa16.11■□□□□ 0.17
SCARB2-221ENST00000640341 STK17AQ9UEE5 414 aa16.11■□□□□ 0.17
SCARB2-221ENST00000640341 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
SCARB2-221ENST00000640341 A0A1W2PQJ5 194 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 G3V3G9 751 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 KLRC1P26715 233 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 CARSP49589 748 aaKnown RBP16.1■□□□□ 0.17
SCARB2-221ENST00000640341 RHBDL3P58872 404 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 GNGT1P63211 74 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 KLHL30Q0D2K2 578 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 TRADDQ15628 312 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 SHROOM1Q2M3G4 852 aaPredicted RBP16.1■□□□□ 0.17
SCARB2-221ENST00000640341 DCAF8Q5TAQ9 597 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 PDXDC1Q6P996 788 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 BCAS4Q8TDM0 211 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 BAP1Q92560 729 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 ARL8AQ96BM9 186 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 TLR10Q9BXR5 811 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 STIM2Q9P246 746 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 GPR75-ASB3A0A0A6YYF3 556 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 PPP1R2P41236 205 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 HLTFQ14527 1009 aaKnown RBP eCLIP16.1■□□□□ 0.17
SCARB2-221ENST00000640341 DOK7Q18PE1 504 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 VIPAS39Q9H9C1 493 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms