RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SH2B2O14492 632 aaPredicted RBP13□□□□□ -0.33
LINC00538-201ENST00000626109 AP5Z1O43299 807 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 KINO60870 393 aaKnown RBP13□□□□□ -0.33
LINC00538-201ENST00000626109 TTLL1O95922 423 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 FOSL1P15407 271 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 CDC25BP30305 580 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 ATP2B2Q01814 1243 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 SPECC1Q5M775 1068 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 IFIT1BQ5T764 474 aaKnown RBP13□□□□□ -0.33
LINC00538-201ENST00000626109 CLEC10AQ8IUN9 316 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 ENAHQ8N8S7 591 aaPredicted RBP13□□□□□ -0.33
LINC00538-201ENST00000626109 NELL1Q92832 810 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 ELP3Q9H9T3 547 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 NYAP2Q9P242 653 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 FRMD4AQ9P2Q2 1039 aaPredicted RBP13□□□□□ -0.33
LINC00538-201ENST00000626109 PCDHGB7Q9Y5F8 929 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 EEF2P13639 858 aaKnown RBP13□□□□□ -0.33
LINC00538-201ENST00000626109 PTPRAP18433 802 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
LINC00538-201ENST00000626109 ZNF75DP51815 510 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 ZNF131P52739 623 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 HUNKP57058 714 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 EVCP57679 992 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 COL19A1Q14993 1142 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 STX1AQ16623 288 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 ZCCHC8Q6NZY4 707 aaKnown RBP13□□□□□ -0.33
LINC00538-201ENST00000626109 ERAP2Q6P179 960 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 IGDCC4Q8TDY8 1250 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 CLMNQ96JQ2 1002 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 NAT10Q9H0A0 1025 aaKnown RBP13□□□□□ -0.33
LINC00538-201ENST00000626109 SH2D4AQ9H788 454 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 PARP2Q9UGN5 583 aa13□□□□□ -0.33
LINC00538-201ENST00000626109 CCDC69A6NI79 296 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 NEMFO60524 1076 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 TOP1P11387 765 aaKnown RBP12.99□□□□□ -0.33
LINC00538-201ENST00000626109 CTHP32929 405 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 ZNF76P36508 570 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 CASP2P42575 452 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 LIFRP42702 1097 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 CCT2P78371 535 aaKnown RBP12.99□□□□□ -0.33
LINC00538-201ENST00000626109 SEC23AQ15436 765 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 CCDC84Q86UT8 332 aaPredicted RBP12.99□□□□□ -0.33
LINC00538-201ENST00000626109 PLA2G4DQ86XP0 818 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 ERO1BQ86YB8 467 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 FRS2Q8WU20 508 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 SLC10A4Q96EP9 437 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 FEZ1Q99689 392 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 FAM126AQ9BYI3 521 aaPredicted RBP12.99□□□□□ -0.33
LINC00538-201ENST00000626109 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 LY9Q9HBG7 655 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 ANO10Q9NW15 660 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 CLIP2Q9UDT6 1046 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 ZHX2Q9Y6X8 837 aa12.99□□□□□ -0.33
LINC00538-201ENST00000626109 BECN2A8MW95 431 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 LILRB3O75022 631 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 CTDNEP1O95476 244 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 ADD1P35611 737 aaKnown RBP12.98□□□□□ -0.33
LINC00538-201ENST00000626109 PIK3CAP42336 1068 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 NOVP48745 357 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 RCSD1Q6JBY9 416 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 C16orf87Q6PH81 154 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 ANKS1AQ92625 1134 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 KCNF1Q9H3M0 494 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 GPHNQ9NQX3 736 aaPredicted RBP12.98□□□□□ -0.33
LINC00538-201ENST00000626109 ABT1Q9ULW3 272 aaKnown RBP12.98□□□□□ -0.33
LINC00538-201ENST00000626109 ME1P48163 572 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 CEBPZQ03701 1054 aaKnown RBP12.98□□□□□ -0.33
LINC00538-201ENST00000626109 PPATQ06203 517 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 ZRSR1Q15695 479 aaKnown RBP12.98□□□□□ -0.33
LINC00538-201ENST00000626109 ZNF394Q53GI3 561 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 SARM1Q6SZW1 724 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 CCDC186Q7Z3E2 898 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 LRRC47Q8N1G4 583 aaKnown RBP12.98□□□□□ -0.33
LINC00538-201ENST00000626109 ZNF280CQ8ND82 737 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 TMEM47Q9BQJ4 181 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 WDR18Q9BV38 432 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 DAAM1Q9Y4D1 1078 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 TLL2Q9Y6L7 1015 aa12.98□□□□□ -0.33
LINC00538-201ENST00000626109 PTGS1P23219 599 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 TSPAN7P41732 249 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 SYNE3Q6ZMZ3 975 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 CATIPQ7Z7H3 387 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 SAPCD2Q86UD0 394 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 OPTNQ96CV9 577 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 YY1AP1Q9H869 796 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 RBM28Q9NW13 759 aaKnown RBP12.97□□□□□ -0.33
LINC00538-201ENST00000626109 RTEL1Q9NZ71 1219 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
LINC00538-201ENST00000626109 KLF18A0A0U1RQI7 1052 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 USP17L10C9JJH3 530 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 MAP3K7O43318 606 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 SCGB1D2O95969 90 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 ECE1P42892 770 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 SPP2Q13103 211 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 PPIL2Q13356 520 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms