RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 ZNF536O15090 1300 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 KCNJ18B7U540 433 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 CCNE1P24864 410 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 KCNJ12Q14500 433 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 NBPF12Q5TAG4 269 aaPredicted RBP21.97■■□□□ 1.11
TREX1-205ENST00000625293 E4F1Q66K89 784 aaPredicted RBP21.97■■□□□ 1.11
TREX1-205ENST00000625293 TC2NQ8N9U0 490 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 DUSP9Q99956 384 aaKnown RBP21.97■■□□□ 1.11
TREX1-205ENST00000625293 THAP9Q9H5L6 903 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 ZNF408Q9H9D4 720 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 MSH4O15457 936 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 CFBP00751 764 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 HOXA7P31268 230 aaPredicted RBP21.97■■□□□ 1.11
TREX1-205ENST00000625293 STAT3P40763 770 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 COPB1P53618 953 aaKnown RBP21.97■■□□□ 1.11
TREX1-205ENST00000625293 GOLGA8FQ08AF8 430 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 GOLGA8DPQ0D2H9 430 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 FILIP1LQ4L180 1135 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 P2RX5Q93086 422 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 DNAJC19Q96DA6 116 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 ZNF112Q9UJU3 913 aa21.97■■□□□ 1.11
TREX1-205ENST00000625293 SMCHD1A6NHR9 2005 aa21.96■■□□□ 1.11
TREX1-205ENST00000625293 ITIH6Q6UXX5 1313 aa21.96■■□□□ 1.11
TREX1-205ENST00000625293 NRDCO43847 1150 aa21.96■■□□□ 1.11
TREX1-205ENST00000625293 ICAM1P05362 532 aa21.96■■□□□ 1.11
TREX1-205ENST00000625293 FCHSD1Q86WN1 690 aa21.96■■□□□ 1.11
TREX1-205ENST00000625293 NOC3LQ8WTT2 800 aaKnown RBP21.96■■□□□ 1.11
TREX1-205ENST00000625293 DDX12PQ92771 950 aa21.96■■□□□ 1.11
TREX1-205ENST00000625293 UIMC1Q96RL1 719 aa21.96■■□□□ 1.11
TREX1-205ENST00000625293 VAV3Q9UKW4 847 aa21.96■■□□□ 1.11
TREX1-205ENST00000625293 POTEB3A0JP26 581 aa21.95■■□□□ 1.1
TREX1-205ENST00000625293 MED24O75448 989 aa21.95■■□□□ 1.1
TREX1-205ENST00000625293 POTEBQ6S5H4 581 aa21.95■■□□□ 1.1
TREX1-205ENST00000625293 NYAP1Q6ZVC0 841 aa21.95■■□□□ 1.1
TREX1-205ENST00000625293 CYP2W1Q8TAV3 490 aa21.95■■□□□ 1.1
TREX1-205ENST00000625293 HPS3Q969F9 1004 aa21.95■■□□□ 1.1
TREX1-205ENST00000625293 PRIMPOLQ96LW4 560 aa21.95■■□□□ 1.1
TREX1-205ENST00000625293 SLF1Q9BQI6 1058 aa21.95■■□□□ 1.1
TREX1-205ENST00000625293 KIAA1024Q9UPX6 916 aa21.95■■□□□ 1.1
TREX1-205ENST00000625293 EEF1GP26641 437 aaKnown RBP21.94■■□□□ 1.1
TREX1-205ENST00000625293 GHRHRQ02643 423 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 HAUS3Q68CZ6 603 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 DYMQ7RTS9 669 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 SULF1Q8IWU6 871 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 PRPF38AQ8NAV1 312 aaKnown RBP21.94■■□□□ 1.1
TREX1-205ENST00000625293 TRIM47Q96LD4 638 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 WDR18Q9BV38 432 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 BICDL2A1A5D9 508 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 E9PMD0 336 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 CELF2O95319 508 aaKnown RBP21.94■■□□□ 1.1
TREX1-205ENST00000625293 DCAF15Q66K64 600 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 APOBEC3FQ8IUX4 373 aaKnown RBP21.94■■□□□ 1.1
TREX1-205ENST00000625293 ANKRD20A12PQ8NF67 263 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 C16orf45Q96MC5 204 aaPredicted RBP21.94■■□□□ 1.1
TREX1-205ENST00000625293 TAB2Q9NYJ8 693 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 STK24Q9Y6E0 443 aa21.94■■□□□ 1.1
TREX1-205ENST00000625293 TMEM88BA6NKF7 163 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 PLA2G4BP0C869 781 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 SPATA31C1P0DKV0 1188 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 HSD17B4P51659 736 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 PSMD2Q13200 908 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 ANKRD40Q6AI12 368 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 CENPPQ6IPU0 288 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 CATSPER3Q86XQ3 398 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 DNAJC5GQ8N7S2 189 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 AGBL1Q96MI9 1066 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 SRRTQ9BXP5 876 aaKnown RBP21.93■■□□□ 1.1
TREX1-205ENST00000625293 SLC39A2Q9NP94 309 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 EMILIN3Q9NT22 766 aa21.93■■□□□ 1.1
TREX1-205ENST00000625293 N4BP3O15049 544 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 TPM2P07951 284 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 RPA1P27694 616 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 DGKZQ13574 1117 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 SCYL3Q8IZE3 742 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 GUF1Q8N442 669 aaKnown RBP21.92■■□□□ 1.1
TREX1-205ENST00000625293 ERMNQ8TAM6 284 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 SEMA6BQ9H3T3 888 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 CCPG1Q9ULG6 757 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 DOCK1Q14185 1865 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 TNNT1P13805 278 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 ZNF76P36508 570 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 SLC12A3P55017 1021 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 NCAPH2Q6IBW4 605 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 CLEC4DQ8WXI8 215 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 VPS16Q9H269 839 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 EHMT1Q9H9B1 1298 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 SLC38A10Q9HBR0 1119 aa21.92■■□□□ 1.1
TREX1-205ENST00000625293 VCAM1P19320 739 aa21.91■■□□□ 1.1
TREX1-205ENST00000625293 ADKP55263 362 aaKnown RBP21.91■■□□□ 1.1
TREX1-205ENST00000625293 MTMR2Q13614 643 aa21.91■■□□□ 1.1
TREX1-205ENST00000625293 FOXR2Q6PJQ5 311 aa21.91■■□□□ 1.1
TREX1-205ENST00000625293 CSGALNACT2Q8N6G5 542 aa21.91■■□□□ 1.1
TREX1-205ENST00000625293 SLC5A5Q92911 643 aa21.91■■□□□ 1.1
TREX1-205ENST00000625293 HOOK2Q96ED9 719 aa21.91■■□□□ 1.1
TREX1-205ENST00000625293 CDCA5Q96FF9 252 aa21.91■■□□□ 1.1
TREX1-205ENST00000625293 PPP1R13BQ96KQ4 1090 aa21.91■■□□□ 1.1
TREX1-205ENST00000625293 CREBZFQ9NS37 354 aa21.91■■□□□ 1.1
TREX1-205ENST00000625293 TRMT1Q9NXH9 659 aaKnown RBP21.91■■□□□ 1.1
TREX1-205ENST00000625293 RPTORQ8N122 1335 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 POTEFA5A3E0 1075 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms