RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 POTEB3A0JP26 581 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 POTECB2RU33 542 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 B4DLN1 442 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 E9PMD0 336 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 NFKBIEO00221 500 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 PES1O00541 588 aaKnown RBP21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 WNT10BO00744 389 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 FANCGO15287 622 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 PLA2G6O60733 806 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 HOXA13P31271 388 aaPredicted RBP21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 LRRC63Q05C16 580 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 POTEBQ6S5H4 581 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 MIGA2Q7L4E1 593 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 EEF2KMTQ96G04 330 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 RANBP17Q9H2T7 1088 aaKnown RBP21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 SH2D4AQ9H788 454 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 SMCHD1A6NHR9 2005 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 PLA2G4BP0C869 781 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 STAT3P40763 770 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 MTIF2P46199 727 aaKnown RBP21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 ERVK-24P63145 666 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 COASYQ13057 564 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 CIAPIN1Q6FI81 312 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 CYP26C1Q6V0L0 522 aa21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 MRPL44Q9H9J2 332 aaKnown RBP21.96■■□□□ 1.11
PCDHB11-202ENST00000624887 FER1L6Q2WGJ9 1857 aa21.95■■□□□ 1.1
PCDHB11-202ENST00000624887 TTC26A0AVF1 554 aa21.95■■□□□ 1.1
PCDHB11-202ENST00000624887 MED24O75448 989 aa21.95■■□□□ 1.1
PCDHB11-202ENST00000624887 MIIPQ5JXC2 388 aa21.95■■□□□ 1.1
PCDHB11-202ENST00000624887 CAPN11Q9UMQ6 739 aa21.95■■□□□ 1.1
PCDHB11-202ENST00000624887 STK24Q9Y6E0 443 aa21.95■■□□□ 1.1
PCDHB11-202ENST00000624887 FGFR1OPO95684 399 aaKnown RBP21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 GNG11P61952 73 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 NAA30Q147X3 362 aaPredicted RBP21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 NBPF9Q3BBW0 867 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 FAM160B2Q86V87 743 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 ERMNQ8TAM6 284 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 JDP2Q8WYK2 163 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 NOC4LQ9BVI4 516 aaKnown RBP21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 MYOZ2Q9NPC6 264 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 PANK4Q9NVE7 773 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 ABCB11O95342 1321 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 SSBP05455 408 aaKnown RBP eCLIP21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 TBC1D8BQ0IIM8 1120 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 RETREG2Q8NC44 543 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 OR8K1Q8NGG5 319 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 DNAJC7Q99615 494 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 NUP58Q9BVL2 599 aa21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 LUC7L2Q9Y383 392 aaKnown RBP21.94■■□□□ 1.1
PCDHB11-202ENST00000624887 MSH4O15457 936 aa21.93■■□□□ 1.1
PCDHB11-202ENST00000624887 ASNSP08243 561 aa21.93■■□□□ 1.1
PCDHB11-202ENST00000624887 RPA1P27694 616 aa21.93■■□□□ 1.1
PCDHB11-202ENST00000624887 FAM26FQ5R3K3 315 aa21.93■■□□□ 1.1
PCDHB11-202ENST00000624887 CATSPER3Q86XQ3 398 aa21.93■■□□□ 1.1
PCDHB11-202ENST00000624887 CCDC65Q8IXS2 484 aa21.93■■□□□ 1.1
PCDHB11-202ENST00000624887 KIFC2Q96AC6 838 aa21.93■■□□□ 1.1
PCDHB11-202ENST00000624887 WDR24Q96S15 920 aa21.93■■□□□ 1.1
PCDHB11-202ENST00000624887 CYP11B2P19099 503 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 SLC12A3P55017 1021 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 NCAPH2Q6IBW4 605 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 GPBP1Q86WP2 473 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 MYOCDQ8IZQ8 938 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 GLIS3Q8NEA6 775 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 NLGN2Q8NFZ4 835 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 ERGIC2Q96RQ1 377 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 TTYH3Q9C0H2 523 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 LTBP3Q9NS15 1303 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 POTEFA5A3E0 1075 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 POTEIP0CG38 1075 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 CASQ1P31415 396 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 ZYXQ15942 572 aaKnown RBP21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 CCDC174Q6PII3 467 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 POTEGQ6S5H5 508 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 POTEEQ6S8J3 1075 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 TSG101Q99816 390 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 FEM1BQ9UK73 627 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 VAV3Q9UKW4 847 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 PITPNM2Q9BZ72 1349 aa21.92■■□□□ 1.1
PCDHB11-202ENST00000624887 GCOM1H8Y6P7 765 aaPredicted RBP21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 CFBP00751 764 aa21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 POLR2MP0CAP2 368 aa21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 SPATA31C1P0DKV0 1188 aa21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 ZNF76P36508 570 aa21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 LRRC41Q15345 812 aa21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 LRRC55Q6ZSA7 311 aa21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 CYP2W1Q8TAV3 490 aa21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 GLIS2Q9BZE0 524 aaPredicted RBP21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 SPON1Q9HCB6 807 aa21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 MRPL11Q9Y3B7 192 aaKnown RBP21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 PCDHA2Q9Y5H9 948 aa21.91■■□□□ 1.1
PCDHB11-202ENST00000624887 IGLV3-22A0A075B6J6 115 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 FRMD3A2A2Y4 597 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 RASSF10A6NK89 507 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 URI1O94763 535 aaPredicted RBP21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 TNIP1Q15025 636 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 ZCWPW2Q504Y3 356 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 FIGNQ5HY92 759 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 FKBP15Q5T1M5 1219 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 PDCL2Q8N4E4 241 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms