RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 OPA1O60313 960 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 NAT1P18440 290 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 CCDC15Q0P6D6 951 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 TMEM62Q0P6H9 643 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
LITAF-221ENST00000622633 GRM4Q14833 912 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 SLC44A5Q8NCS7 719 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 SH3RF3Q8TEJ3 882 aaPredicted RBP13.72□□□□□ -0.21
LITAF-221ENST00000622633 LRRC15Q8TF66 581 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 EEF2KMTQ96G04 330 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 SPAG5Q96R06 1193 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 SETDB2Q96T68 719 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 PAGR1Q9BTK6 254 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 A0A1B0GUL6 1792 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 DLEC1Q9Y238 1755 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 RREB1Q92766 1687 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 PDS5AQ29RF7 1337 aaKnown RBP13.72□□□□□ -0.21
LITAF-221ENST00000622633 NUTM2BA6NNL0 878 aaPredicted RBP13.71□□□□□ -0.21
LITAF-221ENST00000622633 NUTM2EB1AL46 878 aaPredicted RBP13.71□□□□□ -0.21
LITAF-221ENST00000622633 NDUFAB1O14561 156 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 KLRC4O43908 158 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 ATP6V1G1O75348 118 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 FERP16591 822 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 TUBB2AQ13885 445 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 TUBB2BQ9BVA1 445 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 PHACTR1Q9C0D0 580 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 DNAAF2Q9NVR5 837 aaKnown RBP13.71□□□□□ -0.21
LITAF-221ENST00000622633 GUCA1BQ9UMX6 200 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 LGALS16A8MUM7 142 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 NDUFA10O95299 355 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 GOLGA8HP0CJ92 632 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 GNAT1P11488 350 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 CDC25CP30307 473 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 GGCXP38435 758 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 MYBPC2Q14324 1141 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 GRIK5Q16478 980 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 TRIM47Q96LD4 638 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 SH3GL2Q99962 352 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 GORASP1Q9BQQ3 440 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 CPVLQ9H3G5 476 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 EBF2Q9HAK2 575 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 TFR2Q9UP52 801 aa13.71□□□□□ -0.21
LITAF-221ENST00000622633 AGPSO00116 658 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 DIXDC1Q155Q3 683 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 ACBD5Q5T8D3 534 aaPredicted RBP13.7□□□□□ -0.22
LITAF-221ENST00000622633 PTF1AQ7RTS3 328 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 ANKS1AQ92625 1134 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 LUC7L2Q9Y383 392 aaKnown RBP13.7□□□□□ -0.22
LITAF-221ENST00000622633 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 SCN7AQ01118 1682 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 CTAGE15A4D2H0 777 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 STXBP3O00186 592 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 CTAGE8P0CG41 777 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 GNAQP50148 359 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 LRRC23Q53EV4 343 aaPredicted RBP13.7□□□□□ -0.22
LITAF-221ENST00000622633 SPTY2D1Q68D10 685 aaPredicted RBP13.7□□□□□ -0.22
LITAF-221ENST00000622633 NCAPH2Q6IBW4 605 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 CTAGE6Q86UF2 777 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 CTAGE4Q8IX94 777 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 ARL10Q8N8L6 244 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 ZNF507Q8TCN5 953 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 NUP58Q9BVL2 599 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 NYXQ9GZU5 481 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 SAP30BPQ9UHR5 308 aaKnown RBP13.7□□□□□ -0.22
LITAF-221ENST00000622633 STX8Q9UNK0 236 aa13.7□□□□□ -0.22
LITAF-221ENST00000622633 CAPN15O75808 1086 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 LDHBP07195 334 aaKnown RBP13.69□□□□□ -0.22
LITAF-221ENST00000622633 TM4SF1P30408 202 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 WHAMMP3Q1A5X7 153 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
LITAF-221ENST00000622633 SFMBT2Q5VUG0 894 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 SDCCAG8Q86SQ7 713 aaPredicted RBP13.69□□□□□ -0.22
LITAF-221ENST00000622633 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
LITAF-221ENST00000622633 NOA1Q8NC60 698 aaKnown RBP13.69□□□□□ -0.22
LITAF-221ENST00000622633 TGFBRAP1Q8WUH2 860 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 TRIM4Q9C037 500 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 CCSER1Q9C0I3 900 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 KBTBD4Q9NVX7 518 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 BARHL2Q9NY43 387 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 MYO1AQ9UBC5 1043 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
LITAF-221ENST00000622633 MYH8P13535 1937 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 A6NHS1 94 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 B4DLN1 442 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 PSMA7O14818 248 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 RHOBTB3O94955 611 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 KIF4AO95239 1232 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 ZNF24P17028 368 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 AMPD2Q01433 879 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 STIM1Q13586 685 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 TTI2Q6NXR4 508 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 GIMAP8Q8ND71 665 aaPredicted RBP13.69□□□□□ -0.22
LITAF-221ENST00000622633 ZFAND2BQ8WV99 257 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 CCDC47Q96A33 483 aaKnown RBP13.69□□□□□ -0.22
LITAF-221ENST00000622633 ARPC5LQ9BPX5 153 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
LITAF-221ENST00000622633 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms