RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 MYSM1Q5VVJ2 828 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 IL31RAQ8NI17 732 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 ATXN2LQ8WWM7 1075 aaKnown RBP20.6■□□□□ 0.89
SSBP1-215ENST00000612337 ALG1Q9BT22 464 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 THEGQ9P2T0 379 aa20.6■□□□□ 0.89
SSBP1-215ENST00000612337 TGFB3P10600 412 aa20.59■□□□□ 0.89
SSBP1-215ENST00000612337 CCND2P30279 289 aa20.59■□□□□ 0.89
SSBP1-215ENST00000612337 GPNMBQ14956 572 aa20.59■□□□□ 0.89
SSBP1-215ENST00000612337 CCDC85BQ15834 202 aaPredicted RBP20.59■□□□□ 0.89
SSBP1-215ENST00000612337 LRRC8DQ7L1W4 858 aa20.59■□□□□ 0.89
SSBP1-215ENST00000612337 CATIPQ7Z7H3 387 aa20.59■□□□□ 0.89
SSBP1-215ENST00000612337 HERC6Q8IVU3 1022 aa20.59■□□□□ 0.89
SSBP1-215ENST00000612337 MB21D2Q8IYB1 491 aaPredicted RBP20.59■□□□□ 0.89
SSBP1-215ENST00000612337 MAP4K1Q92918 833 aa20.59■□□□□ 0.89
SSBP1-215ENST00000612337 SPATA33Q96N06 139 aa20.59■□□□□ 0.89
SSBP1-215ENST00000612337 KIF28PB7ZC32 967 aa20.58■□□□□ 0.89
SSBP1-215ENST00000612337 GGPS1O95749 300 aa20.58■□□□□ 0.89
SSBP1-215ENST00000612337 CKBP12277 381 aa20.58■□□□□ 0.89
SSBP1-215ENST00000612337 UBA1P22314 1058 aaKnown RBP20.58■□□□□ 0.89
SSBP1-215ENST00000612337 KCNA4P22459 653 aa20.58■□□□□ 0.89
SSBP1-215ENST00000612337 ANTXR2P58335 489 aa20.58■□□□□ 0.89
SSBP1-215ENST00000612337 SP2Q02086 613 aa20.58■□□□□ 0.89
SSBP1-215ENST00000612337 HSDL1Q3SXM5 330 aa20.58■□□□□ 0.89
SSBP1-215ENST00000612337 FCHSD1Q86WN1 690 aa20.58■□□□□ 0.89
SSBP1-215ENST00000612337 IGDCC4Q8TDY8 1250 aa20.58■□□□□ 0.89
SSBP1-215ENST00000612337 NCOR1O75376 2440 aa20.57■□□□□ 0.88
SSBP1-215ENST00000612337 CXCL10P02778 98 aa20.57■□□□□ 0.88
SSBP1-215ENST00000612337 KCNJ6P48051 423 aa20.57■□□□□ 0.88
SSBP1-215ENST00000612337 PTK7Q13308 1070 aa20.57■□□□□ 0.88
SSBP1-215ENST00000612337 MAP3K14Q99558 947 aa20.57■□□□□ 0.88
SSBP1-215ENST00000612337 FRMPD4Q14CM0 1322 aa20.56■□□□□ 0.88
SSBP1-215ENST00000612337 SORBS3O60504 671 aa20.56■□□□□ 0.88
SSBP1-215ENST00000612337 WDR5P61964 334 aaKnown RBP20.56■□□□□ 0.88
SSBP1-215ENST00000612337 IRX6P78412 446 aaPredicted RBP20.56■□□□□ 0.88
SSBP1-215ENST00000612337 CNKSR3Q6P9H4 555 aa20.56■□□□□ 0.88
SSBP1-215ENST00000612337 ASB2Q96Q27 587 aa20.56■□□□□ 0.88
SSBP1-215ENST00000612337 RBM8AQ9Y5S9 174 aaKnown RBP20.56■□□□□ 0.88
SSBP1-215ENST00000612337 PTPRSQ13332 1948 aa20.56■□□□□ 0.88
SSBP1-215ENST00000612337 PRRC2BQ5JSZ5 2229 aaKnown RBP20.55■□□□□ 0.88
SSBP1-215ENST00000612337 NBNO60934 754 aa20.55■□□□□ 0.88
SSBP1-215ENST00000612337 STAM2O75886 525 aa20.55■□□□□ 0.88
SSBP1-215ENST00000612337 POU3F3P20264 500 aaPredicted RBP20.55■□□□□ 0.88
SSBP1-215ENST00000612337 MRPS5P82675 430 aaKnown RBP20.55■□□□□ 0.88
SSBP1-215ENST00000612337 TAP1Q03518 808 aa20.55■□□□□ 0.88
SSBP1-215ENST00000612337 TRIM71Q2Q1W2 868 aaKnown RBP20.55■□□□□ 0.88
SSBP1-215ENST00000612337 GNPTABQ3T906 1256 aa20.55■□□□□ 0.88
SSBP1-215ENST00000612337 GPKOWQ92917 476 aaPredicted RBP eCLIP20.55■□□□□ 0.885e-7■■■■■ 43.5
SSBP1-215ENST00000612337 ZFP91Q96JP5 570 aaPredicted RBP20.55■□□□□ 0.88
SSBP1-215ENST00000612337 MTA3Q9BTC8 594 aa20.55■□□□□ 0.88
SSBP1-215ENST00000612337 TSPYL2Q9H2G4 693 aaPredicted RBP20.55■□□□□ 0.88
SSBP1-215ENST00000612337 CERS4Q9HA82 394 aa20.55■□□□□ 0.88
SSBP1-215ENST00000612337 MLXIPQ9HAP2 919 aa20.55■□□□□ 0.88
SSBP1-215ENST00000612337 BDP1A6H8Y1 2624 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 TLL1O43897 1013 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 DDAH1O94760 285 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 MRPS9P82933 396 aaKnown RBP20.54■□□□□ 0.88
SSBP1-215ENST00000612337 ZNF200P98182 395 aaPredicted RBP20.54■□□□□ 0.88
SSBP1-215ENST00000612337 TRAF7Q6Q0C0 670 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 ZNF654Q8IZM8 581 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 MICALL1Q8N3F8 863 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 WNT8BQ93098 351 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 C16orf70Q9BSU1 422 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 SPZ1Q9BXG8 430 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 LY9Q9HBG7 655 aa20.54■□□□□ 0.88
SSBP1-215ENST00000612337 EPOPA6NHQ4 379 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 RFXAPO00287 272 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 GTPBP6O43824 516 aaPredicted RBP20.53■□□□□ 0.88
SSBP1-215ENST00000612337 ARHGEF15O94989 841 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 SMARCA1P28370 1054 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 ICAM3P32942 547 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 KIF5BP33176 963 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 HIC1Q14526 733 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 ZNF618Q5T7W0 954 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 CASC1Q6TDU7 716 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 CTCFLQ8NI51 663 aaPredicted RBP20.53■□□□□ 0.88
SSBP1-215ENST00000612337 PIBF1Q8WXW3 757 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 INPP4AQ96PE3 977 aaPredicted RBP20.53■□□□□ 0.88
SSBP1-215ENST00000612337 MTCH2Q9Y6C9 303 aa20.53■□□□□ 0.88
SSBP1-215ENST00000612337 ABHD14A-ACY1A0A1B0GW23 586 aa20.52■□□□□ 0.88
SSBP1-215ENST00000612337 TNFRSF10AO00220 468 aa20.52■□□□□ 0.88
SSBP1-215ENST00000612337 EFCAB14O75071 495 aa20.52■□□□□ 0.88
SSBP1-215ENST00000612337 NEDD9Q14511 834 aa20.52■□□□□ 0.88
SSBP1-215ENST00000612337 ARNTL2Q8WYA1 636 aa20.52■□□□□ 0.88
SSBP1-215ENST00000612337 RRP36Q96EU6 259 aaKnown RBP20.52■□□□□ 0.88
SSBP1-215ENST00000612337 LZTS2Q9BRK4 669 aa20.52■□□□□ 0.88
SSBP1-215ENST00000612337 MYL10Q9BUA6 226 aa20.52■□□□□ 0.88
SSBP1-215ENST00000612337 SPATA31C2B4DYI2 1134 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 H3BRB1 525 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 PRC1O43663 620 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 LGALS2P05162 132 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 HOXC8P31273 242 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 DEFB103AP81534 67 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 IKBKEQ14164 716 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 MBTPS1Q14703 1052 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 TCTN1Q2MV58 587 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 METTL7BQ6UX53 244 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 SERINC5Q86VE9 423 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 TMTC2Q8N394 836 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 LSG1Q9H089 658 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms