RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 H2AFZP0C0S5 128 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 CACNB3P54284 484 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 NT5DC1Q5TFE4 455 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 PDXDC2PQ6P474 469 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 CLEC4GQ6UXB4 293 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 UNC13DQ70J99 1090 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 H2AFVQ71UI9 128 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 TMEM139Q8IV31 216 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 ELOA2Q8IYF1 753 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 SH2D3CQ8N5H7 860 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 CCSER1Q9C0I3 900 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 SH3GLB2Q9NR46 395 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 EMILIN3Q9NT22 766 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 PPP1R1BQ9UD71 204 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 STK17AQ9UEE5 414 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 UTP11Q9Y3A2 253 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 PRPF6O94906 941 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 RHOBTB3O94955 611 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 PLA2G4BP0C869 781 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 STAT1P42224 750 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 KCNB1Q14721 858 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 INTS5Q6P9B9 1019 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 IQCDQ96DY2 449 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 KCND1Q9NSA2 647 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 LEMD3Q9Y2U8 911 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 FAM237AA0A1B0GTK4 181 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 MYMKA6NI61 221 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 SPOPO43791 374 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 IFT88Q13099 833 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 FAM83BQ5T0W9 1011 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 GIMAP8Q8ND71 665 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 VEZTQ9HBM0 779 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 RIC8AQ9NPQ8 531 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 SNX12Q9UMY4 172 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 TACC3Q9Y6A5 838 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 LMTK3Q96Q04 1460 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 POTEB3A0JP26 581 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 POTECB2RU33 542 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 GNA14O95837 355 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 EZH2Q15910 746 aaKnown RBP7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 SLFN13Q68D06 897 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 CCDC174Q6PII3 467 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 POTEBQ6S5H4 581 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 KSR1Q8IVT5 923 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 TBC1D22AQ8WUA7 517 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 KCNK9Q9NPC2 374 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 SERPINB13Q9UIV8 391 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 RASAL2Q9UJF2 1139 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 ANAPC4Q9UJX5 808 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 RIC1Q4ADV7 1423 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 KDM3AQ9Y4C1 1321 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 ANO9A1A5B4 782 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 LRRN2O75325 713 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 GFPT2O94808 682 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 STAT3P40763 770 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 LRRC63Q05C16 580 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 NFIXQ14938 502 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 PPP1R7Q15435 360 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 TTBK2Q6IQ55 1244 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 GBP6Q6ZN66 633 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 SRLQ86TD4 932 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 GOLPH3Q9H4A6 298 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 AMFRQ9UKV5 643 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 NPHP3-ACAD11A0A0J9YXS1 232 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 STXBP3O00186 592 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 TTLL1O95922 423 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 SERPING1P05155 500 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 HERVK_113P62684 666 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 ASPRV1Q53RT3 343 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 ALKBH5Q6P6C2 394 aaKnown RBP7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 CCNI2Q6ZMN8 369 aaPredicted RBP7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 RUFY4Q6ZNE9 571 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 MARCH10Q8NA82 808 aaPredicted RBP7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 BICD1Q96G01 975 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 HDAC9Q9UKV0 1011 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 CAPN6Q9Y6Q1 641 aa7.53□□□□□ -1.2
SYNPO2-206ENST00000610556 FAM208AQ9UK61 1670 aaKnown RBP7.52□□□□□ -1.2
SYNPO2-206ENST00000610556 ARHGEF35A5YM69 484 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 USP17L10C9JJH3 530 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 PSMD14O00487 310 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 GDF11O95390 407 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 ATP2B4P23634 1241 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 HOXA13P31271 388 aaPredicted RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 COASYQ13057 564 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 GRIPAP1Q4V328 841 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 TTI2Q6NXR4 508 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 TMED8Q6PL24 325 aaPredicted RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 FBXO33Q7Z6M2 555 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 MGARPQ8TDB4 240 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 MED15Q96RN5 788 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 CD209Q9NNX6 404 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 DMGDHQ9UI17 866 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 HPCAL4Q9UM19 191 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 THRAP3Q9Y2W1 955 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 NFAT5O94916 1531 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 POTEFA5A3E0 1075 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 ANKRD62A6NC57 917 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 UBAP1LF5GYI3 381 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 KIF4AO95239 1232 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 KRT14P02533 472 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms