RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 KRT25Q7Z3Z0 450 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 RNF10Q8N5U6 811 aaKnown RBP18.69■□□□□ 0.58
TNIP1-220ENST00000610535 ANKS1AQ92625 1134 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 CEP89Q96ST8 783 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 NUDT12Q9BQG2 462 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 MEFVO15553 781 aaPredicted RBP18.69■□□□□ 0.58
TNIP1-220ENST00000610535 KIAA0754O94854 1291 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 NR1D1P20393 614 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 FNTAP49354 379 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 TXNRD3Q86VQ6 643 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 GUF1Q8N442 669 aaKnown RBP18.69■□□□□ 0.58
TNIP1-220ENST00000610535 EPN3Q9H201 632 aa18.69■□□□□ 0.58
TNIP1-220ENST00000610535 PROCA1Q8NCQ7 364 aaPredicted RBP18.68■□□□□ 0.58
TNIP1-220ENST00000610535 TBC1D5Q92609 795 aa18.68■□□□□ 0.58
TNIP1-220ENST00000610535 SSU72P8A0A1W2PR75 194 aa18.68■□□□□ 0.58
TNIP1-220ENST00000610535 NOL4O94818 638 aa18.68■□□□□ 0.58
TNIP1-220ENST00000610535 USP17L2Q6R6M4 530 aa18.68■□□□□ 0.58
TNIP1-220ENST00000610535 KCNK18Q7Z418 384 aa18.68■□□□□ 0.58
TNIP1-220ENST00000610535 KLHL7Q8IXQ5 586 aa18.68■□□□□ 0.58
TNIP1-220ENST00000610535 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
TNIP1-220ENST00000610535 CNPY4Q8N129 248 aa18.68■□□□□ 0.58
TNIP1-220ENST00000610535 LARP4BQ92615 738 aaKnown RBP18.68■□□□□ 0.58
TNIP1-220ENST00000610535 NCAPGQ9BPX3 1015 aa18.68■□□□□ 0.58
TNIP1-220ENST00000610535 PACSIN1Q9BY11 444 aa18.68■□□□□ 0.58
TNIP1-220ENST00000610535 GEMIN8Q9NWZ8 242 aaKnown RBP18.68■□□□□ 0.58
TNIP1-220ENST00000610535 COL16A1Q07092 1604 aaPredicted RBP18.68■□□□□ 0.58
TNIP1-220ENST00000610535 POTEMA6NI47 508 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 A6NNZ2 444 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 POLR2FP61218 127 aaKnown RBP18.67■□□□□ 0.58
TNIP1-220ENST00000610535 TUBB8Q3ZCM7 444 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 SLC9C1Q4G0N8 1177 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 FAM83BQ5T0W9 1011 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 SLC51AQ86UW1 340 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 PRPF38AQ8NAV1 312 aaKnown RBP18.67■□□□□ 0.58
TNIP1-220ENST00000610535 SH3RF3Q8TEJ3 882 aaPredicted RBP18.67■□□□□ 0.58
TNIP1-220ENST00000610535 ZNF473Q8WTR7 871 aaKnown RBP18.67■□□□□ 0.58
TNIP1-220ENST00000610535 CENPHQ9H3R5 247 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 PPP1R37O75864 691 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 NAB2Q15742 525 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 PTGISQ16647 500 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 SFMBT2Q5VUG0 894 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 MAATS1Q7Z4T9 603 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 DZIP1Q86YF9 867 aaKnown RBP18.67■□□□□ 0.58
TNIP1-220ENST00000610535 NGLY1Q96IV0 654 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 CCT8L2Q96SF2 557 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.67■□□□□ 0.58
TNIP1-220ENST00000610535 C6orf50Q9HD87 102 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 TSKSQ9UJT2 592 aa18.67■□□□□ 0.58
TNIP1-220ENST00000610535 PVALEFA0A1B0GWK0 134 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 RAD51CO43502 376 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 FGFR1OPO95684 399 aaKnown RBP18.66■□□□□ 0.58
TNIP1-220ENST00000610535 HPDP32754 393 aaPredicted RBP18.66■□□□□ 0.58
TNIP1-220ENST00000610535 SF3B3Q15393 1217 aaKnown RBP18.66■□□□□ 0.58
TNIP1-220ENST00000610535 CEP85LQ5SZL2 805 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 RNF187Q5TA31 235 aaPredicted RBP18.66■□□□□ 0.58
TNIP1-220ENST00000610535 DDX12PQ92771 950 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 CDK5RAP3Q96JB5 506 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 ATP6V1G3Q96LB4 118 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 RNF14Q9UBS8 474 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 SAP30BPQ9UHR5 308 aaKnown RBP18.66■□□□□ 0.58
TNIP1-220ENST00000610535 PLAAQ9Y263 795 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 COL22A1Q8NFW1 1626 aaPredicted RBP18.66■□□□□ 0.58
TNIP1-220ENST00000610535 RREB1Q92766 1687 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 CASZ1Q86V15 1759 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 A0A087X0T9 212 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 RBAK-RBAKDNI3L0D1 243 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 FAM228BP0C875 321 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 HDLBPQ00341 1268 aaKnown RBP18.66■□□□□ 0.58
TNIP1-220ENST00000610535 LRRC63Q05C16 580 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 CDC37Q16543 378 aaPredicted RBP18.66■□□□□ 0.58
TNIP1-220ENST00000610535 PTPROQ16827 1216 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 KIAA0753Q2KHM9 967 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 INPP4AQ96PE3 977 aaPredicted RBP18.66■□□□□ 0.58
TNIP1-220ENST00000610535 ADAMTS1Q9UHI8 967 aa18.66■□□□□ 0.58
TNIP1-220ENST00000610535 MDH1P40925 334 aaKnown RBP18.65■□□□□ 0.58
TNIP1-220ENST00000610535 MEI1Q5TIA1 1274 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 OR2W6PQ8NHA6 318 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 MYCBPQ99417 103 aaPredicted RBP18.65■□□□□ 0.58
TNIP1-220ENST00000610535 LSM14BQ9BX40 385 aaKnown RBP18.65■□□□□ 0.58
TNIP1-220ENST00000610535 GOLPH3Q9H4A6 298 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 TBC1D7Q9P0N9 293 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 TRAF5O00463 557 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 SLC37A4O43826 429 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 SERPING1P05155 500 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 NLRP14Q86W24 1093 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 DNAAF5Q86Y56 855 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 MREGQ8N565 214 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 TGFBRAP1Q8WUH2 860 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 MTMR9Q96QG7 549 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 PIGSQ96S52 555 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 UBA5Q9GZZ9 404 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 PHLPP1O60346 1717 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 KIAA1551Q9HCM1 1747 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 TDP2O95551 362 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 GNA11P29992 359 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 IFT88Q13099 833 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 ITGB3BPQ13352 177 aaPredicted RBP18.65■□□□□ 0.58
TNIP1-220ENST00000610535 SF3B2Q13435 895 aaKnown RBP18.65■□□□□ 0.58
TNIP1-220ENST00000610535 DIXDC1Q155Q3 683 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms