RNA–Protein interactions for RNA: ENST00000592618.5

TMEM259-210, Transcript of transmembrane protein 259, human

TSL 5

Gene TMEM259, Length 1,877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-210	ENST00000592618	CSAD	Q9Y600	493 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	MYMK	A6NI61	221 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	STAT3	P40763	770 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	PRCP	P42785	496 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	IREB2	P48200	963 aa	Known RBP	27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	ASIC1	P78348	528 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	SLC5A5	Q92911	643 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	TRERF1	Q96PN7	1200 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	UIMC1	Q96RL1	719 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	SCN4A	P35499	1836 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	FRMPD4	Q14CM0	1322 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	PTPRF	P10586	1907 aa		27.59	■■■□□ 2.01
TMEM259-210	ENST00000592618	COL11A1	P12107	1806 aa	Predicted RBP	27.58	■■■□□ 2.01
TMEM259-210	ENST00000592618	RPA1	P27694	616 aa		27.58	■■■□□ 2.01
TMEM259-210	ENST00000592618	UBASH3A	P57075	661 aa		27.58	■■■□□ 2.01
TMEM259-210	ENST00000592618	SET	Q01105	290 aa	Predicted RBP	27.58	■■■□□ 2.01
TMEM259-210	ENST00000592618	PAK1	Q13153	545 aa		27.58	■■■□□ 2.01
TMEM259-210	ENST00000592618	SAMSN1	Q9NSI8	373 aa	Known RBP	27.58	■■■□□ 2.01
TMEM259-210	ENST00000592618	GRIN3B	O60391	1043 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	PSMD10	O75832	226 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	SERPINC1	P01008	464 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	COBLL1	Q53SF7	1204 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	KCTD17	Q8N5Z5	321 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	HOXC10	Q9NYD6	342 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	IMPACT	Q9P2X3	320 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	KIAA1024	Q9UPX6	916 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	CTNND2	Q9UQB3	1225 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	MED24	O75448	989 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	STX17	P56962	302 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	UBXN2A	P68543	259 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	DHX8	Q14562	1220 aa	Known RBP	27.57	■■■□□ 2
TMEM259-210	ENST00000592618	CCDC144B	Q3MJ40	725 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	CDKAL1	Q5VV42	579 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	UNC13D	Q70J99	1090 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	NIPA1	Q7RTP0	329 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	CDCA5	Q96FF9	252 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	MXRA8	Q9BRK3	442 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	EXOC1	Q9NV70	894 aa		27.57	■■■□□ 2
TMEM259-210	ENST00000592618	ZNF214	Q9UL59	606 aa	Predicted RBP	27.57	■■■□□ 2
TMEM259-210	ENST00000592618	BCR	P11274	1271 aa		27.56	■■■□□ 2
TMEM259-210	ENST00000592618	HOXA7	P31268	230 aa	Predicted RBP	27.56	■■■□□ 2
TMEM259-210	ENST00000592618	RPS6	P62753	249 aa	Known RBP	27.56	■■■□□ 2
TMEM259-210	ENST00000592618	PDE4D	Q08499	809 aa		27.56	■■■□□ 2
TMEM259-210	ENST00000592618	CATSPER3	Q86XQ3	398 aa		27.56	■■■□□ 2
TMEM259-210	ENST00000592618	MAF1	Q9H063	256 aa		27.56	■■■□□ 2
TMEM259-210	ENST00000592618	HOMER2	Q9NSB8	354 aa		27.56	■■■□□ 2
TMEM259-210	ENST00000592618	POTEB3	A0JP26	581 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	POTEC	B2RU33	542 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	SPATA31C1	P0DKV0	1188 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	NF2	P35240	595 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	PPP1R2	P41236	205 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	PPP2R5C	Q13362	524 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	NCAPH2	Q6IBW4	605 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	POTEB	Q6S5H4	581 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	OTOP1	Q7RTM1	612 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	NELFB	Q8WX92	580 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	POLR3C	Q9BUI4	534 aa	Predicted RBP	27.55	■■■□□ 2
TMEM259-210	ENST00000592618	CDK11B	P21127	795 aa	Known RBP	27.55	■■■□□ 2
TMEM259-210	ENST00000592618	LRMP	Q12912	555 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	STIM1	Q13586	685 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	PCNX4	Q63HM2	1172 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	RIPK3	Q9Y572	518 aa		27.55	■■■□□ 2
TMEM259-210	ENST00000592618	PPAT	Q06203	517 aa		27.54	■■■□□ 2
TMEM259-210	ENST00000592618	LRCH2	Q5VUJ6	765 aa		27.54	■■■□□ 2
TMEM259-210	ENST00000592618	ANKRD13A	Q8IZ07	590 aa		27.54	■■■□□ 2
TMEM259-210	ENST00000592618	DDX12P	Q92771	950 aa		27.54	■■■□□ 2
TMEM259-210	ENST00000592618	DHTKD1	Q96HY7	919 aa	Predicted RBP	27.54	■■■□□ 2
TMEM259-210	ENST00000592618	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.54	■■■□□ 2
TMEM259-210	ENST00000592618	RNF146	Q9NTX7	359 aa		27.54	■■■□□ 2
TMEM259-210	ENST00000592618	IQCA1L	A6NCM1	817 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	EHHADH	Q08426	723 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	TMEM132B	Q14DG7	1078 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	RNF207	Q6ZRF8	634 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	CACTIN	Q8WUQ7	758 aa	Known RBP	27.53	■■■□□ 2
TMEM259-210	ENST00000592618	SPDYE16	A6NNV3	312 aa	Predicted RBP	27.53	■■■□□ 2
TMEM259-210	ENST00000592618		E9PMD0	336 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	ITGB5	P18084	799 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	STK4	Q13043	487 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	TKFC	Q3LXA3	575 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	SNRNP48	Q6IEG0	339 aa	Known RBP	27.53	■■■□□ 2
TMEM259-210	ENST00000592618	DNAJC19	Q96DA6	116 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	UBIAD1	Q9Y5Z9	338 aa		27.53	■■■□□ 2
TMEM259-210	ENST00000592618	UQCRHL	A0A096LP55	91 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	PSMA7	O14818	248 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	UQCRH	P07919	91 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	PLA2G4B	P0C869	781 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	AR	P10275	920 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	B3GNT9	Q6UX72	402 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	APTX	Q7Z2E3	356 aa	Known RBP	27.52	■■■□□ 2
TMEM259-210	ENST00000592618	ERO1B	Q86YB8	467 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	PRIMPOL	Q96LW4	560 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	TAAR1	Q96RJ0	339 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	RIT2	Q99578	217 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	HSD17B14	Q9BPX1	270 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	ZNF577	Q9BSK1	485 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	TEX13B	Q9BXU2	312 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	WDR11	Q9BZH6	1224 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	MAPK8IP1	Q9UQF2	711 aa		27.52	■■■□□ 2
TMEM259-210	ENST00000592618	EML1	O00423	815 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms