RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 KRT40Q6A162 431 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 DSTYKQ6XUX3 929 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 GTF3C6Q969F1 213 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 GPRASP2Q96D09 838 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 ABHD16BQ9H3Z7 469 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 KMT5AQ9NQR1 393 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 ERAP1Q9NZ08 941 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 SHTN1A0MZ66 631 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 DAPK3O43293 454 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 ADCY3O60266 1144 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 EIF3JO75822 258 aaKnown RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 HMGCRP04035 888 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 KRT19P08727 400 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 NEFHP12036 1026 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 HARSP12081 509 aaKnown RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 TNNI1P19237 187 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 C12orf60Q5U649 245 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 SDE2Q6IQ49 451 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 CCDC84Q86UT8 332 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 NUP88Q99567 741 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 APBA2Q99767 749 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 RAVER2Q9HCJ3 691 aaKnown RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 SRPRBQ9Y5M8 271 aaKnown RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 TBX3O15119 743 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 SART1O43290 800 aaKnown RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 DYNLL1P63167 89 aaKnown RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 MAP2K5Q13163 448 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 PSMD2Q13200 908 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 PCBP1Q15365 356 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 KLHL10Q6JEL2 608 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 TAF2Q6P1X5 1199 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 C16orf86Q6ZW13 317 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 TRIM11Q96F44 468 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 ANO3Q9BYT9 981 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 TMEM39AQ9NV64 488 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 SEL1LQ9UBV2 794 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 PRR12Q9ULL5 1215 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 ATP2A2P16615 1042 aaKnown RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 PSMC5P62195 406 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 GRM4Q14833 912 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 TWF2Q6IBS0 349 aaKnown RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 LCORLQ8N3X6 602 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 HAUS1Q96CS2 278 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 TTC1Q99614 292 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 C1orf112Q9NSG2 853 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 DAAM1Q9Y4D1 1078 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 TRAF5O00463 557 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 CAPN9O14815 690 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 P4HBP07237 508 aaKnown RBP6.92□□□□□ -1.3
SMAD4-212ENST00000591126 PRDX5P30044 214 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 TUBB4BP68371 445 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 PPFIA1Q13136 1202 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 KCTD1Q719H9 257 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 EFCAB13Q8IY85 973 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 MTMR14Q8NCE2 650 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 EMSYQ7Z589 1322 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 ZW10O43264 779 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 GCNT3O95395 438 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 MOCS3O95396 460 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 CCDC184Q52MB2 194 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 HSP90B2PQ58FF3 399 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 WNK4Q96J92 1243 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 NAP1L3Q99457 506 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-212ENST00000591126 GZF1Q9H116 711 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-212ENST00000591126 SLC9A2Q9UBY0 812 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 RASAL2Q9UJF2 1139 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 ZBTB12Q9Y330 459 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-212ENST00000591126 K7ENM7 598 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 DYNC1LI2O43237 492 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-212ENST00000591126 ERLIN1O75477 346 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 MUTP22033 750 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 GBP1P32455 592 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 KRT83P78385 493 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 NFX1Q12986 1120 aaKnown RBP6.92□□□□□ -1.3
SMAD4-212ENST00000591126 ANO1Q5XXA6 986 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 ARL6IP4Q66PJ3 421 aaKnown RBP6.92□□□□□ -1.3
SMAD4-212ENST00000591126 CD302Q8IX05 232 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 SKA1Q96BD8 255 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 GLIS2Q9BZE0 524 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-212ENST00000591126 GBP3Q9H0R5 595 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 LMCD1Q9NZU5 365 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 KCND2Q9NZV8 630 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 PCDHA10Q9Y5I2 948 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 VWA3AA6NCI4 1184 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 PFKFB2O60825 505 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 IFNAR1P17181 557 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 PRELPP51888 382 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 ZNF174Q15697 407 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 XKR3Q5GH77 459 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 GMCL1P1Q8NEA9 526 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 BBXQ8WY36 941 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-212ENST00000591126 WDR18Q9BV38 432 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 SPZ1Q9BXG8 430 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 BACH2Q9BYV9 841 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 SAGE1Q9NXZ1 904 aa6.92□□□□□ -1.3
SMAD4-212ENST00000591126 RIOK3O14730 519 aaKnown RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 EIF2AK2P19525 551 aaKnown RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 HSPA4P34932 840 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 SNRPFP62306 86 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms