RNA–Protein interactions for RNA: ENST00000589863.5

SAFB-207, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 2,708 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-207ENST00000589863 TTC19Q6DKK2 380 aaPredicted RBP18.78■□□□□ 0.6
SAFB-207ENST00000589863 TSEN2Q8NCE0 465 aaKnown RBP18.78■□□□□ 0.6
SAFB-207ENST00000589863 RASSF4Q9H2L5 321 aa18.78■□□□□ 0.6
SAFB-207ENST00000589863 ZSCAN5CA6NGD5 496 aaPredicted RBP18.78■□□□□ 0.6
SAFB-207ENST00000589863 F8W031 263 aaPredicted RBP18.78■□□□□ 0.6
SAFB-207ENST00000589863 LCA5LO95447 670 aa18.78■□□□□ 0.6
SAFB-207ENST00000589863 KCTD19Q17RG1 926 aaPredicted RBP18.78■□□□□ 0.6
SAFB-207ENST00000589863 KLHDC7AQ5VTJ3 777 aa18.78■□□□□ 0.6
SAFB-207ENST00000589863 HAUS3Q68CZ6 603 aa18.78■□□□□ 0.6
SAFB-207ENST00000589863 IQCEQ6IPM2 695 aa18.78■□□□□ 0.6
SAFB-207ENST00000589863 CNBD1Q8NA66 436 aa18.78■□□□□ 0.6
SAFB-207ENST00000589863 HAS1Q92839 578 aa18.78■□□□□ 0.6
SAFB-207ENST00000589863 MTMR4Q9NYA4 1195 aa18.78■□□□□ 0.6
SAFB-207ENST00000589863 HYOU1Q9Y4L1 999 aa18.78■□□□□ 0.6
SAFB-207ENST00000589863 ESYT2A0FGR8 921 aa18.77■□□□□ 0.6
SAFB-207ENST00000589863 NOL4O94818 638 aa18.77■□□□□ 0.6
SAFB-207ENST00000589863 RFC4P35249 363 aa18.77■□□□□ 0.6
SAFB-207ENST00000589863 LRRC63Q05C16 580 aa18.77■□□□□ 0.6
SAFB-207ENST00000589863 EHHADHQ08426 723 aa18.77■□□□□ 0.6
SAFB-207ENST00000589863 COASYQ13057 564 aa18.77■□□□□ 0.6
SAFB-207ENST00000589863 DNAJC21Q5F1R6 531 aaKnown RBP18.77■□□□□ 0.6
SAFB-207ENST00000589863 RC3H1Q5TC82 1133 aaKnown RBP18.77■□□□□ 0.6
SAFB-207ENST00000589863 DPP8Q6V1X1 898 aaPredicted RBP18.77■□□□□ 0.6
SAFB-207ENST00000589863 DNAJC19Q96DA6 116 aa18.77■□□□□ 0.6
SAFB-207ENST00000589863 ALS2CR12Q96Q35 445 aa18.77■□□□□ 0.6
SAFB-207ENST00000589863 POLD4Q9HCU8 107 aa18.77■□□□□ 0.6
SAFB-207ENST00000589863 PACSIN2Q9UNF0 486 aaPredicted RBP18.77■□□□□ 0.6
SAFB-207ENST00000589863 ESYT3A0FGR9 886 aa18.77■□□□□ 0.59
SAFB-207ENST00000589863 GOLGA6CA6NDK9 693 aa18.77■□□□□ 0.59
SAFB-207ENST00000589863 E9PMD0 336 aa18.77■□□□□ 0.59
SAFB-207ENST00000589863 GOLGA6DP0CG33 693 aa18.77■□□□□ 0.59
SAFB-207ENST00000589863 NT5C2P49902 561 aa18.77■□□□□ 0.59
SAFB-207ENST00000589863 RNASE9P60153 205 aaKnown RBP18.77■□□□□ 0.59
SAFB-207ENST00000589863 GOLGA6AQ9NYA3 693 aa18.77■□□□□ 0.59
SAFB-207ENST00000589863 POLR2FP61218 127 aaKnown RBP18.76■□□□□ 0.59
SAFB-207ENST00000589863 CCDC40Q4G0X9 1142 aa18.76■□□□□ 0.59
SAFB-207ENST00000589863 CCDC70Q6NSX1 233 aa18.76■□□□□ 0.59
SAFB-207ENST00000589863 MYOCDQ8IZQ8 938 aa18.76■□□□□ 0.59
SAFB-207ENST00000589863 JMJD4Q9H9V9 463 aa18.76■□□□□ 0.59
SAFB-207ENST00000589863 FTCDO95954 541 aa18.76■□□□□ 0.59
SAFB-207ENST00000589863 TMEM119Q4V9L6 283 aa18.76■□□□□ 0.59
SAFB-207ENST00000589863 DNAAF5Q86Y56 855 aa18.76■□□□□ 0.59
SAFB-207ENST00000589863 DDX25Q9UHL0 483 aaKnown RBP18.76■□□□□ 0.59
SAFB-207ENST00000589863 MARCH6O60337 910 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 TCP1P17987 556 aaKnown RBP18.75■□□□□ 0.59
SAFB-207ENST00000589863 ZCWPW2Q504Y3 356 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 FAM83BQ5T0W9 1011 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 ADGRF4Q8IZF3 695 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 FAM76AQ8TAV0 307 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 LSM14BQ9BX40 385 aaKnown RBP18.75■□□□□ 0.59
SAFB-207ENST00000589863 COL4A3BPQ9Y5P4 624 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 CDK5RAP2Q96SN8 1893 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 KCTD1Q719H9 257 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 TSG101Q99816 390 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 PACSIN1Q9BY11 444 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 RAB34Q9BZG1 259 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 PANK4Q9NVE7 773 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 STIM2Q9P246 746 aa18.75■□□□□ 0.59
SAFB-207ENST00000589863 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 FGFR1OPO95684 399 aaKnown RBP18.74■□□□□ 0.59
SAFB-207ENST00000589863 PDIA5Q14554 519 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 FAM26FQ5R3K3 315 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 RPGRQ92834 1020 aaKnown RBP18.74■□□□□ 0.59
SAFB-207ENST00000589863 ARL8AQ96BM9 186 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 POLLQ9UGP5 575 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 PJA2O43164 708 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 GLI1P08151 1106 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 PRLRP16471 622 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 KLRC1P26715 233 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 SMARCA1P28370 1054 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 FKBP3Q00688 224 aaKnown RBP18.74■□□□□ 0.59
SAFB-207ENST00000589863 PTPROQ16827 1216 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 C8orf74Q6P047 294 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 ZNF572Q7Z3I7 529 aaPredicted RBP18.74■□□□□ 0.59
SAFB-207ENST00000589863 TBC1D5Q92609 795 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 NOX5Q96PH1 765 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 DDX4Q9NQI0 724 aaKnown RBP18.74■□□□□ 0.59
SAFB-207ENST00000589863 KIAA1024Q9UPX6 916 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 DAGLAQ9Y4D2 1042 aa18.74■□□□□ 0.59
SAFB-207ENST00000589863 AHDC1Q5TGY3 1603 aaPredicted RBP18.74■□□□□ 0.59
SAFB-207ENST00000589863 RAD21O60216 631 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 PALMO75781 387 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 NOVP48745 357 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 TRADDQ15628 312 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 IQCDQ96DY2 449 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.73■□□□□ 0.59
SAFB-207ENST00000589863 ZHX3Q9H4I2 956 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 PODXL2Q9NZ53 605 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 GGA1Q9UJY5 639 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 POTEB3A0JP26 581 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 POTECB2RU33 542 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 USP17L10C9JJH3 530 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
SAFB-207ENST00000589863 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms