RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 CELF3Q5SZQ8 465 aaKnown RBP23.07■■□□□ 1.28
SS18-218ENST00000581021 MYSM1Q5VVJ2 828 aa23.07■■□□□ 1.28
SS18-218ENST00000581021 FAM126BQ8IXS8 530 aa23.07■■□□□ 1.28
SS18-218ENST00000581021 TOX2Q96NM4 488 aa23.07■■□□□ 1.28
SS18-218ENST00000581021 ANO3Q9BYT9 981 aa23.07■■□□□ 1.28
SS18-218ENST00000581021 ZMYND12Q9H0C1 365 aa23.07■■□□□ 1.28
SS18-218ENST00000581021 POLR3EQ9NVU0 708 aa23.07■■□□□ 1.28
SS18-218ENST00000581021 STAM2O75886 525 aa23.06■■□□□ 1.28
SS18-218ENST00000581021 CTDNEP1O95476 244 aa23.06■■□□□ 1.28
SS18-218ENST00000581021 CLTBP09497 229 aa23.06■■□□□ 1.28
SS18-218ENST00000581021 MDM2Q00987 491 aaPredicted RBP23.06■■□□□ 1.28
SS18-218ENST00000581021 ME3Q16798 604 aa23.06■■□□□ 1.28
SS18-218ENST00000581021 XRRA1Q6P2D8 792 aa23.06■■□□□ 1.28
SS18-218ENST00000581021 KAT2BQ92831 832 aa23.06■■□□□ 1.28
SS18-218ENST00000581021 MTG1Q9BT17 334 aaPredicted RBP23.06■■□□□ 1.28
SS18-218ENST00000581021 TBX21Q9UL17 535 aa23.06■■□□□ 1.28
SS18-218ENST00000581021 UBIAD1Q9Y5Z9 338 aa23.06■■□□□ 1.28
SS18-218ENST00000581021 FIBPO43427 364 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 HOXD8P13378 290 aaPredicted RBP23.05■■□□□ 1.28
SS18-218ENST00000581021 ST3GAL1Q11201 340 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 LAMC2Q13753 1193 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 HSDL1Q3SXM5 330 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 GNPTABQ3T906 1256 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 JAKMIP3Q5VZ66 844 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 KCNV1Q6PIU1 500 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 DHX37Q8IY37 1157 aaKnown RBP23.05■■□□□ 1.28
SS18-218ENST00000581021 NECAB1Q8N987 351 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 PPTC7Q8NI37 304 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 CYP2W1Q8TAV3 490 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 RASGRP4Q8TDF6 673 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 SLKQ9H2G2 1235 aaPredicted RBP23.05■■□□□ 1.28
SS18-218ENST00000581021 DOCK5Q9H7D0 1870 aa23.05■■□□□ 1.28
SS18-218ENST00000581021 CPLX1O14810 134 aa23.04■■□□□ 1.28
SS18-218ENST00000581021 KIAA0355O15063 1070 aa23.04■■□□□ 1.28
SS18-218ENST00000581021 CD4P01730 458 aa23.04■■□□□ 1.28
SS18-218ENST00000581021 TGFB3P10600 412 aa23.04■■□□□ 1.28
SS18-218ENST00000581021 AKAP17AQ02040 695 aaKnown RBP23.04■■□□□ 1.28
SS18-218ENST00000581021 SSRP1Q08945 709 aaKnown RBP23.04■■□□□ 1.28
SS18-218ENST00000581021 HABP4Q5JVS0 413 aaKnown RBP23.04■■□□□ 1.28
SS18-218ENST00000581021 TEX2Q8IWB9 1127 aa23.04■■□□□ 1.28
SS18-218ENST00000581021 CRYGNQ8WXF5 182 aa23.04■■□□□ 1.28
SS18-218ENST00000581021 TRPV6Q9H1D0 765 aa23.04■■□□□ 1.28
SS18-218ENST00000581021 ATP9AO75110 1047 aa23.03■■□□□ 1.28
SS18-218ENST00000581021 ZNF286BP0CG31 522 aa23.03■■□□□ 1.28
SS18-218ENST00000581021 SREBF1P36956 1147 aa23.03■■□□□ 1.28
SS18-218ENST00000581021 AP3B2Q13367 1082 aa23.03■■□□□ 1.28
SS18-218ENST00000581021 ANKRD1Q15327 319 aa23.03■■□□□ 1.28
SS18-218ENST00000581021 NBPF20Q3BBV1 942 aa23.03■■□□□ 1.28
SS18-218ENST00000581021 TRIM22Q8IYM9 498 aa23.03■■□□□ 1.28
SS18-218ENST00000581021 SPATA33Q96N06 139 aa23.03■■□□□ 1.28
SS18-218ENST00000581021 C22orf23Q9BZE7 217 aa23.03■■□□□ 1.28
SS18-218ENST00000581021 MYH7BA7E2Y1 1941 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 DCDC2CA8MYV0 355 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 B4GALT4O60513 344 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 FOSP01100 380 aaPredicted RBP23.02■■□□□ 1.28
SS18-218ENST00000581021 KCNA2P16389 499 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 RBM25P49756 843 aaKnown RBP23.02■■□□□ 1.28
SS18-218ENST00000581021 NPY5RQ15761 445 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 BRDTQ58F21 947 aaPredicted RBP23.02■■□□□ 1.28
SS18-218ENST00000581021 REXO1Q8N1G1 1221 aaKnown RBP23.02■■□□□ 1.28
SS18-218ENST00000581021 BADQ92934 168 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 GTF3C6Q969F1 213 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 GPRASP2Q96D09 838 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 GLT8D2Q9H1C3 349 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 C6orf50Q9HD87 102 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 TMEM39AQ9NV64 488 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 MROH7Q68CQ1 1323 aa23.02■■□□□ 1.28
SS18-218ENST00000581021 KPNA6O60684 536 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 DEXIO95424 95 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 BMP8BP34820 402 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 METTL7BQ6UX53 244 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 CYFIP1Q7L576 1253 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 CCDC12Q8WUD4 166 aaPredicted RBP23.01■■□□□ 1.27
SS18-218ENST00000581021 JADE2Q9NQC1 790 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 GJB4Q9NTQ9 266 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 TRMT13Q9NUP7 481 aaKnown RBP23.01■■□□□ 1.27
SS18-218ENST00000581021 PKD2L1Q9P0L9 805 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 PRKAG2Q9UGJ0 569 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 GTF3C3Q9Y5Q9 886 aa23.01■■□□□ 1.27
SS18-218ENST00000581021 EDIL3O43854 480 aa23■■□□□ 1.27
SS18-218ENST00000581021 F2P00734 622 aa23■■□□□ 1.27
SS18-218ENST00000581021 ARHGAP4P98171 946 aa23■■□□□ 1.27
SS18-218ENST00000581021 DGKDQ16760 1214 aa23■■□□□ 1.27
SS18-218ENST00000581021 NLRX1Q86UT6 975 aa23■■□□□ 1.27
SS18-218ENST00000581021 CCDC148Q8NFR7 591 aa23■■□□□ 1.27
SS18-218ENST00000581021 SH3GLB2Q9NR46 395 aa23■■□□□ 1.27
SS18-218ENST00000581021 STK36Q9NRP7 1315 aa23■■□□□ 1.27
SS18-218ENST00000581021 FDPSP14324 419 aaKnown RBP22.99■■□□□ 1.27
SS18-218ENST00000581021 MTMR1Q13613 665 aa22.99■■□□□ 1.27
SS18-218ENST00000581021 CPLX2Q6PUV4 134 aaKnown RBP22.99■■□□□ 1.27
SS18-218ENST00000581021 CTAGE1Q96RT6 745 aa22.99■■□□□ 1.27
SS18-218ENST00000581021 GPR20Q99678 358 aa22.99■■□□□ 1.27
SS18-218ENST00000581021 SENP7Q9BQF6 1050 aa22.99■■□□□ 1.27
SS18-218ENST00000581021 MXRA8Q9BRK3 442 aa22.99■■□□□ 1.27
SS18-218ENST00000581021 C16orf70Q9BSU1 422 aa22.99■■□□□ 1.27
SS18-218ENST00000581021 EHMT1Q9H9B1 1298 aa22.99■■□□□ 1.27
SS18-218ENST00000581021 MLXIPQ9HAP2 919 aa22.99■■□□□ 1.27
SS18-218ENST00000581021 UMODL1Q5DID0 1318 aa22.99■■□□□ 1.27
SS18-218ENST00000581021 FAM86B1E9PN63 330 aa22.98■■□□□ 1.27
SS18-218ENST00000581021 HAS3O00219 553 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms