RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 GOLGA6L9A6NEM1 432 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 BACH1O14867 736 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 DDAH1O94760 285 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 TUBB4AP04350 444 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 TSPY3P0CV98 308 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 TSPY8P0CW00 308 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 UBA7P41226 1012 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 RCAN1P53805 252 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 CLN3Q13286 438 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 SF3B3Q15393 1217 aaKnown RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 KIF4BQ2VIQ3 1234 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 RC3H1Q5TC82 1133 aaKnown RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 SPTY2D1Q68D10 685 aaPredicted RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 SDE2Q6IQ49 451 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 TXNRD3Q86VQ6 643 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 C3orf58Q8NDZ4 430 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 CPVLQ9H3G5 476 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 L2HGDHQ9H9P8 463 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 ANAPC4Q9UJX5 808 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 MYO5AQ9Y4I1 1855 aaKnown RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 ZNF804BA4D1E1 1349 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 PHLPP2Q6ZVD8 1323 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 ERICH4A6NGS2 130 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 POLR3GO15318 223 aaPredicted RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 KIF5CO60282 957 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 GOLGA8HP0CJ92 632 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 ZNF18P17022 549 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 KCNJ6P48051 423 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 SARSP49591 514 aaKnown RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 VEGFBP49765 207 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 CUL4BQ13620 913 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 BMS1Q14692 1282 aaKnown RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 MEI1Q5TIA1 1274 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 CLEC4GQ6UXB4 293 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 SLC44A5Q8NCS7 719 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 ZNF384Q8TF68 577 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 TGFBRAP1Q8WUH2 860 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 MED15Q96RN5 788 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 GTPBP4Q9BZE4 634 aaKnown RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 ANKRD2Q9GZV1 360 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 ST7Q9NRC1 585 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 PUF60Q9UHX1 559 aaKnown RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 PARP3Q9Y6F1 533 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 TOGARAM1Q9Y4F4 1720 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 SEC31AO94979 1220 aaKnown RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 CASP14P31944 242 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 PPP2R3AQ06190 1150 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 ZNF569Q5MCW4 686 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 TRIM65Q6PJ69 517 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 PTF1AQ7RTS3 328 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 MAPKAPK5Q8IW41 473 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 BLIDQ8IZY5 108 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 GSDMAQ96QA5 445 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 CTAGE1Q96RT6 745 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 NYXQ9GZU5 481 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 GDAQ9Y2T3 454 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 DISP2A7MBM2 1401 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 CNTNAP5Q8WYK1 1306 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 PPP1R12BO60237 982 aaPredicted RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 MYCP01106 439 aaPredicted RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 CALML3P27482 149 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 RPIAP49247 311 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 DGKZQ13574 1117 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 NR1I3Q14994 352 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 INF2Q27J81 1249 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 JAZF1Q86VZ6 243 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 ZNF280CQ8ND82 737 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 EPS8L3Q8TE67 593 aaKnown RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 NELFBQ8WX92 580 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 EDEM1Q92611 657 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 SRRTQ9BXP5 876 aaKnown RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 ATP8A2Q9NTI2 1148 aa6.01□□□□□ -1.45
VAPA-203ENST00000577539 ARPP21Q9UBL0 812 aaPredicted RBP6.01□□□□□ -1.45
VAPA-203ENST00000577539 PP2D1A8MPX8 630 aa6□□□□□ -1.45
VAPA-203ENST00000577539 ATP2C1P98194 919 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 PAK1Q13153 545 aa6□□□□□ -1.45
VAPA-203ENST00000577539 NT5DC1Q5TFE4 455 aa6□□□□□ -1.45
VAPA-203ENST00000577539 ZNF746Q6NUN9 644 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 DTHD1Q6ZMT9 781 aa6□□□□□ -1.45
VAPA-203ENST00000577539 FCHSD1Q86WN1 690 aa6□□□□□ -1.45
VAPA-203ENST00000577539 FBF1Q8TES7 1133 aa6□□□□□ -1.45
VAPA-203ENST00000577539 RNF34Q969K3 372 aa6□□□□□ -1.45
VAPA-203ENST00000577539 MRPL44Q9H9J2 332 aaKnown RBP6□□□□□ -1.45
VAPA-203ENST00000577539 METTL14Q9HCE5 456 aaKnown RBP6□□□□□ -1.45
VAPA-203ENST00000577539 KCND1Q9NSA2 647 aa6□□□□□ -1.45
VAPA-203ENST00000577539 PKD2L1Q9P0L9 805 aa6□□□□□ -1.45
VAPA-203ENST00000577539 EPB41L3Q9Y2J2 1087 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 RTCBQ9Y3I0 505 aaKnown RBP6□□□□□ -1.45
VAPA-203ENST00000577539 LRP6O75581 1613 aa6□□□□□ -1.45
VAPA-203ENST00000577539 A0A1B0GTH6 734 aa6□□□□□ -1.45
VAPA-203ENST00000577539 ADAMTS3O15072 1205 aa6□□□□□ -1.45
VAPA-203ENST00000577539 PEX14O75381 377 aa6□□□□□ -1.45
VAPA-203ENST00000577539 THBS1P07996 1170 aa6□□□□□ -1.45
VAPA-203ENST00000577539 ATP4AP20648 1035 aa6□□□□□ -1.45
VAPA-203ENST00000577539 UBXN1Q04323 297 aa6□□□□□ -1.45
VAPA-203ENST00000577539 TBX2Q13207 712 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 PFKFB3Q16875 520 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 PPP1R18Q6NYC8 613 aa6□□□□□ -1.45
VAPA-203ENST00000577539 SLC51AQ86UW1 340 aa6□□□□□ -1.45
VAPA-203ENST00000577539 SLC39A13Q96H72 371 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms