RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 SEC23AQ15436 765 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 FAM47CQ5HY64 1035 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 TMEM67Q5HYA8 995 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 MTG1Q9BT17 334 aaPredicted RBP12.03□□□□□ -0.48
LINC00564-201ENST00000567258 IL25Q9H293 177 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 HIPK3Q9H422 1215 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 NPDC1Q9NQX5 325 aaPredicted RBP12.03□□□□□ -0.48
LINC00564-201ENST00000567258 MAP3K20Q9NYL2 800 aaKnown RBP12.03□□□□□ -0.48
LINC00564-201ENST00000567258 TBX21Q9UL17 535 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 PCDHA1Q9Y5I3 950 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 MYO9BQ13459 2157 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 COL6A3P12111 3177 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 EDNRBP24530 442 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 CHMP4BP1P59074 171 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 PSMC6P62333 389 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 PSRC1Q6PGN9 363 aaPredicted RBP12.02□□□□□ -0.49
LINC00564-201ENST00000567258 SEPT14Q6ZU15 432 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 HOMER1Q86YM7 354 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.49
LINC00564-201ENST00000567258 STAG2Q8N3U4 1231 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 SAMD3Q8N6K7 520 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 SLC43A3Q8NBI5 491 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 SYTL5Q8TDW5 730 aaPredicted RBP12.02□□□□□ -0.49
LINC00564-201ENST00000567258 TAAR1Q96RJ0 339 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 WDR70Q9NW82 654 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 MAD2L2Q9UI95 211 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 NOD1Q9Y239 953 aa12.02□□□□□ -0.49
LINC00564-201ENST00000567258 RBM8AQ9Y5S9 174 aaKnown RBP12.02□□□□□ -0.49
LINC00564-201ENST00000567258 SCN10AQ9Y5Y9 1956 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 KAT6AQ92794 2004 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 GH1P01241 217 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 CD4P01730 458 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 CSF2RAP15509 400 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 EIF2AK2P19525 551 aaKnown RBP12.01□□□□□ -0.49
LINC00564-201ENST00000567258 KIF5BP33176 963 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 CYP2C18P33260 490 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 PURAQ00577 322 aaKnown RBP12.01□□□□□ -0.49
LINC00564-201ENST00000567258 GRM4Q14833 912 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 NFXL1Q6ZNB6 911 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 TRIM67Q6ZTA4 783 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 CHST3Q7LGC8 479 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 TMTC2Q8N394 836 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 CTCFLQ8NI51 663 aaPredicted RBP12.01□□□□□ -0.49
LINC00564-201ENST00000567258 MAP4K1Q92918 833 aa12.01□□□□□ -0.49
LINC00564-201ENST00000567258 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC00564-201ENST00000567258 GBF1Q92538 1859 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 PALM3A6NDB9 673 aaPredicted RBP12□□□□□ -0.49
LINC00564-201ENST00000567258 CCDC69A6NI79 296 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 B4GALT4O60513 344 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 EIF3JO75822 258 aaKnown RBP12□□□□□ -0.49
LINC00564-201ENST00000567258 FGBP02675 491 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 NR3C2P08235 984 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 MYCLP12524 364 aaPredicted RBP12□□□□□ -0.49
LINC00564-201ENST00000567258 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
LINC00564-201ENST00000567258 PTGS1P23219 599 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 MCM5P33992 734 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 EPHB4P54760 987 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 TMEM63BQ5T3F8 832 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 RNF20Q5VTR2 975 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 KCNV1Q6PIU1 500 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 CENPQQ7L2Z9 268 aaPredicted RBP12□□□□□ -0.49
LINC00564-201ENST00000567258 TBC1D5Q92609 795 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 TRPV6Q9H1D0 765 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
LINC00564-201ENST00000567258 IL23AQ9NPF7 189 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 PXMP2Q9NR77 195 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 SEC63Q9UGP8 760 aaKnown RBP12□□□□□ -0.49
LINC00564-201ENST00000567258 PCDHB3Q9Y5E6 796 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 MRVI1Q9Y6F6 885 aa12□□□□□ -0.49
LINC00564-201ENST00000567258 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 PNMA6FA0A0J9YX94 578 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 A6NJR5 290 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 RNF223E7ERA6 249 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 GCOM1H8Y6P7 765 aaPredicted RBP11.99□□□□□ -0.49
LINC00564-201ENST00000567258 POLR2MP0CAP2 368 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 ACRP10323 421 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 SLC19A1P41440 591 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 GNAQP50148 359 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 HSD17B4P51659 736 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 CCL23P55773 120 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 DGKDQ16760 1214 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 LY6KQ17RY6 165 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 NBPF20Q3BBV1 942 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 TMEM240Q5SV17 173 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 NFRKBQ6P4R8 1299 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 ZNF365Q70YC5 407 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 DHX37Q8IY37 1157 aaKnown RBP11.99□□□□□ -0.49
LINC00564-201ENST00000567258 CCDC155Q8N6L0 562 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 RETREG2Q8NC44 543 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 COPS5Q92905 334 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 CUL5Q93034 780 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 RRP36Q96EU6 259 aaKnown RBP11.99□□□□□ -0.49
LINC00564-201ENST00000567258 PIGSQ96S52 555 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 MTA3Q9BTC8 594 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 SEMA6BQ9H3T3 888 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 ANO2Q9NQ90 1003 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 SCN5AQ14524 2016 aa11.99□□□□□ -0.49
LINC00564-201ENST00000567258 GRIN2DO15399 1336 aa11.98□□□□□ -0.49
LINC00564-201ENST00000567258 PRC1O43663 620 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms