RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 LRRC2Q9BYS8 371 aa20.14■□□□□ 0.81
MAP1LC3B-207ENST00000565788 HDAC6Q9UBN7 1215 aa20.14■□□□□ 0.81
MAP1LC3B-207ENST00000565788 GTF2IRD1Q9UHL9 959 aa20.14■□□□□ 0.81
MAP1LC3B-207ENST00000565788 A0A0C4DFX4 3053 aa20.14■□□□□ 0.81
MAP1LC3B-207ENST00000565788 MYO9BQ13459 2157 aa20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 HAS3O00219 553 aa20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 HOXD8P13378 290 aaPredicted RBP20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 HSDL1Q3SXM5 330 aa20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 RAB11FIP4Q86YS3 637 aa20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 TMTC2Q8N394 836 aa20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SRBD1Q8N5C6 995 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SPATA33Q96N06 139 aa20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 KATNAL1Q9BW62 490 aa20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 PRDM12Q9H4Q4 367 aa20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 DOCK5Q9H7D0 1870 aa20.13■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SMARCA1P28370 1054 aa20.12■□□□□ 0.81
MAP1LC3B-207ENST00000565788 LIFRP42702 1097 aa20.12■□□□□ 0.81
MAP1LC3B-207ENST00000565788 MRPS9P82933 396 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-207ENST00000565788 KIAA0753Q2KHM9 967 aa20.12■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CMTR1Q8N1G2 835 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-207ENST00000565788 C7orf31Q8N865 590 aa20.12■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CAGE1Q8TC20 777 aa20.12■□□□□ 0.81
MAP1LC3B-207ENST00000565788 LZTS2Q9BRK4 669 aa20.12■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SEC63Q9UGP8 760 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-207ENST00000565788 TGFB3P10600 412 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 MYOGP15173 224 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 ATP2A2P16615 1042 aaKnown RBP20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 GNAQP50148 359 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 USP17L6PQ6QN14 398 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CCDC155Q8N6L0 562 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 USP38Q8NB14 1042 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SMARCC2Q8TAQ2 1214 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 AFAP1L1Q8TED9 768 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 FTOQ9C0B1 505 aaKnown RBP eCLIP20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 BCAS3Q9H6U6 928 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SLC28A3Q9HAS3 691 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 PRUNE2Q8WUY3 3088 aa20.11■□□□□ 0.81
MAP1LC3B-207ENST00000565788 MEIS2O14770 477 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 PPFIA4O75335 1185 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CALM1P0DP23 149 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CALM2P0DP24 149 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CALM3P0DP25 149 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 ACTN1P12814 892 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SEMA3FQ13275 785 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 GNPTABQ3T906 1256 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 INPP4AQ96PE3 977 aaPredicted RBP20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 GAS2L1Q99501 681 aaPredicted RBP20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 MLXIPQ9HAP2 919 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 RTEL1Q9NZ71 1219 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 PCDHA11Q9Y5I1 949 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SLC12A7Q9Y666 1083 aa20.1■□□□□ 0.81
MAP1LC3B-207ENST00000565788 STAM2O75886 525 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SELPP16109 830 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 ICAM3P32942 547 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 ZNF200P98182 395 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 RBL2Q08999 1139 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 HIC1Q14526 733 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 GPNMBQ14956 572 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 LRRC8DQ7L1W4 858 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CUL5Q93034 780 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 COL25A1Q9BXS0 654 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CHD9Q3L8U1 2897 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 PTPRSQ13332 1948 aa20.09■□□□□ 0.81
MAP1LC3B-207ENST00000565788 hCG_1642624A0A1W2PR95 340 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 PIK3CDO00329 1044 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CKBP12277 381 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 ADGRE1Q14246 886 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 PPP2R2DQ66LE6 453 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 TMTC3Q6ZXV5 915 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 MICU3Q86XE3 530 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 CCDC82Q8N4S0 544 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 WNT8BQ93098 351 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SLC9A7Q96T83 725 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 C16orf70Q9BSU1 422 aa20.08■□□□□ 0.81
MAP1LC3B-207ENST00000565788 SPATA31C2B4DYI2 1134 aa20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 RBAK-RBAKDNI3L0D1 243 aa20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 FIBPO43427 364 aa20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 LGALS2P05162 132 aa20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 PTK7Q13308 1070 aa20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 TRIM71Q2Q1W2 868 aaKnown RBP20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 RNF20Q5VTR2 975 aa20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 SGMS1Q86VZ5 419 aa20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 FANCBQ8NB91 859 aa20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 TCEANC2Q96MN5 208 aa20.07■□□□□ 0.8
MAP1LC3B-207ENST00000565788 NBNO60934 754 aa20.06■□□□□ 0.8
MAP1LC3B-207ENST00000565788 NEDD9Q14511 834 aa20.06■□□□□ 0.8
MAP1LC3B-207ENST00000565788 PCNX4Q63HM2 1172 aa20.06■□□□□ 0.8
MAP1LC3B-207ENST00000565788 METTL7BQ6UX53 244 aa20.06■□□□□ 0.8
MAP1LC3B-207ENST00000565788 CYFIP1Q7L576 1253 aa20.06■□□□□ 0.8
MAP1LC3B-207ENST00000565788 NEK1Q96PY6 1258 aa20.06■□□□□ 0.8
MAP1LC3B-207ENST00000565788 TELO2Q9Y4R8 837 aa20.06■□□□□ 0.8
MAP1LC3B-207ENST00000565788 CUL9Q8IWT3 2517 aa20.06■□□□□ 0.8
MAP1LC3B-207ENST00000565788 H3BRB1 525 aa20.05■□□□□ 0.8
MAP1LC3B-207ENST00000565788 NOP56O00567 594 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-207ENST00000565788 CDC45O75419 566 aa20.05■□□□□ 0.8
MAP1LC3B-207ENST00000565788 BAIAP3O94812 1187 aa20.05■□□□□ 0.8
MAP1LC3B-207ENST00000565788 CXCL10P02778 98 aa20.05■□□□□ 0.8
MAP1LC3B-207ENST00000565788 CA3P07451 260 aa20.05■□□□□ 0.8
MAP1LC3B-207ENST00000565788 UBE2SQ16763 222 aa20.05■□□□□ 0.8
MAP1LC3B-207ENST00000565788 ADCK5Q3MIX3 580 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms