RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 POLR2MP0CAP2 368 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 TGFB3P10600 412 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 CCND2P30279 289 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 HOXA13P31271 388 aaPredicted RBP24.24■■□□□ 1.47
HERC2-204ENST00000563945 GPNMBQ14956 572 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 CELF3Q5SZQ8 465 aaKnown RBP24.24■■□□□ 1.47
HERC2-204ENST00000563945 MYSM1Q5VVJ2 828 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 STOX1Q6ZVD7 989 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 TMCO2Q7Z6W1 182 aaPredicted RBP24.24■■□□□ 1.47
HERC2-204ENST00000563945 VSIG10LQ86VR7 867 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 C1QTNF1Q9BXJ1 281 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 CHD7Q9P2D1 2997 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 LAMA4Q16363 1823 aa24.24■■□□□ 1.47
HERC2-204ENST00000563945 HAS3O00219 553 aa24.23■■□□□ 1.47
HERC2-204ENST00000563945 DEFB103AP81534 67 aa24.23■■□□□ 1.47
HERC2-204ENST00000563945 ZNF618Q5T7W0 954 aa24.23■■□□□ 1.47
HERC2-204ENST00000563945 FAM117BQ6P1L5 589 aa24.23■■□□□ 1.47
HERC2-204ENST00000563945 FCHSD1Q86WN1 690 aa24.23■■□□□ 1.47
HERC2-204ENST00000563945 LMCD1Q9NZU5 365 aa24.23■■□□□ 1.47
HERC2-204ENST00000563945 MAD2L2Q9UI95 211 aa24.23■■□□□ 1.47
HERC2-204ENST00000563945 EMSYQ7Z589 1322 aa24.22■■□□□ 1.47
HERC2-204ENST00000563945 LCHNA4D1U4 455 aa24.22■■□□□ 1.47
HERC2-204ENST00000563945 IFIT3O14879 490 aaKnown RBP24.22■■□□□ 1.47
HERC2-204ENST00000563945 GJB5O95377 273 aa24.22■■□□□ 1.47
HERC2-204ENST00000563945 ZNF200P98182 395 aaPredicted RBP24.22■■□□□ 1.47
HERC2-204ENST00000563945 GHRHRQ02643 423 aa24.22■■□□□ 1.47
HERC2-204ENST00000563945 PGM5Q15124 567 aa24.22■■□□□ 1.47
HERC2-204ENST00000563945 TGS1Q96RS0 853 aaKnown RBP24.22■■□□□ 1.47
HERC2-204ENST00000563945 MTUS1Q9ULD2 1270 aa24.22■■□□□ 1.47
HERC2-204ENST00000563945 U3KPZ7 1027 aaPredicted RBP24.22■■□□□ 1.47
HERC2-204ENST00000563945 MYH7BA7E2Y1 1941 aa24.22■■□□□ 1.47
HERC2-204ENST00000563945 PALM3A6NDB9 673 aaPredicted RBP24.21■■□□□ 1.47
HERC2-204ENST00000563945 OPLAHO14841 1288 aa24.21■■□□□ 1.47
HERC2-204ENST00000563945 LGR5O75473 907 aa24.21■■□□□ 1.47
HERC2-204ENST00000563945 THPOP40225 353 aa24.21■■□□□ 1.47
HERC2-204ENST00000563945 SART3Q15020 963 aaKnown RBP24.21■■□□□ 1.47
HERC2-204ENST00000563945 SEC23AQ15436 765 aa24.21■■□□□ 1.47
HERC2-204ENST00000563945 HSDL1Q3SXM5 330 aa24.21■■□□□ 1.47
HERC2-204ENST00000563945 RUFY2Q8WXA3 655 aa24.21■■□□□ 1.47
HERC2-204ENST00000563945 MTMR8Q96EF0 704 aa24.21■■□□□ 1.47
HERC2-204ENST00000563945 C17orf102A2RUQ5 167 aa24.2■■□□□ 1.46
HERC2-204ENST00000563945 RSPH10B2B2RC85 870 aa24.2■■□□□ 1.46
HERC2-204ENST00000563945 NOP56O00567 594 aaKnown RBP24.2■■□□□ 1.46
HERC2-204ENST00000563945 PPP1R11O60927 126 aaPredicted RBP24.2■■□□□ 1.46
HERC2-204ENST00000563945 RGS20O76081 388 aa24.2■■□□□ 1.46
HERC2-204ENST00000563945 AMHP03971 560 aa24.2■■□□□ 1.46
HERC2-204ENST00000563945 RSPH10BP0C881 870 aa24.2■■□□□ 1.46
HERC2-204ENST00000563945 CYB5R4Q7L1T6 521 aa24.2■■□□□ 1.46
HERC2-204ENST00000563945 RALYLQ86SE5 291 aaKnown RBP24.2■■□□□ 1.46
HERC2-204ENST00000563945 GDPD5Q8WTR4 605 aa24.2■■□□□ 1.46
HERC2-204ENST00000563945 PIGSQ96S52 555 aa24.2■■□□□ 1.46
HERC2-204ENST00000563945 INSL6Q9Y581 213 aa24.2■■□□□ 1.46
HERC2-204ENST00000563945 HOXD8P13378 290 aaPredicted RBP24.19■■□□□ 1.46
HERC2-204ENST00000563945 UBA1P22314 1058 aaKnown RBP24.19■■□□□ 1.46
HERC2-204ENST00000563945 ERVK-21P61565 698 aa24.19■■□□□ 1.46
HERC2-204ENST00000563945 TRIM71Q2Q1W2 868 aaKnown RBP24.19■■□□□ 1.46
HERC2-204ENST00000563945 GNPTABQ3T906 1256 aa24.19■■□□□ 1.46
HERC2-204ENST00000563945 EXOC6Q8TAG9 804 aa24.19■■□□□ 1.46
HERC2-204ENST00000563945 ATP6V0A1Q93050 837 aa24.19■■□□□ 1.46
HERC2-204ENST00000563945 ZFP91Q96JP5 570 aaPredicted RBP24.19■■□□□ 1.46
HERC2-204ENST00000563945 YTHDC1Q96MU7 727 aaKnown RBP24.19■■□□□ 1.46
HERC2-204ENST00000563945 PNMA6FA0A0J9YX94 578 aa24.18■■□□□ 1.46
HERC2-204ENST00000563945 H3BRB1 525 aa24.18■■□□□ 1.46
HERC2-204ENST00000563945 LPXNO60711 386 aa24.18■■□□□ 1.46
HERC2-204ENST00000563945 GRM4Q14833 912 aa24.18■■□□□ 1.46
HERC2-204ENST00000563945 WTAPQ15007 396 aa24.18■■□□□ 1.46
HERC2-204ENST00000563945 SPRED2Q7Z698 418 aa24.18■■□□□ 1.46
HERC2-204ENST00000563945 TUT1Q9H6E5 874 aaKnown RBP24.18■■□□□ 1.46
HERC2-204ENST00000563945 RIOX1Q9H6W3 641 aa24.18■■□□□ 1.46
HERC2-204ENST00000563945 TRANK1O15050 2925 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 LINC01553A4QN01 128 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 GNAT1P11488 350 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 SP2Q02086 613 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 CATIPQ7Z7H3 387 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 SERINC5Q86VE9 423 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 MYOCDQ8IZQ8 938 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 DBF4BQ8NFT6 615 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 IL31RAQ8NI17 732 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 WNT8BQ93098 351 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 C16orf70Q9BSU1 422 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 SUGCTQ9HAC7 445 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 RAPGEFL1Q9UHV5 662 aa24.17■■□□□ 1.46
HERC2-204ENST00000563945 NEDD9Q14511 834 aa24.16■■□□□ 1.46
HERC2-204ENST00000563945 TCTN1Q2MV58 587 aa24.16■■□□□ 1.46
HERC2-204ENST00000563945 NCOA7Q8NI08 942 aa24.16■■□□□ 1.46
HERC2-204ENST00000563945 SEPT8Q92599 483 aa24.16■■□□□ 1.46
HERC2-204ENST00000563945 USP26Q9BXU7 913 aa24.16■■□□□ 1.46
HERC2-204ENST00000563945 STAM2O75886 525 aa24.15■■□□□ 1.46
HERC2-204ENST00000563945 TRAF7Q6Q0C0 670 aa24.15■■□□□ 1.46
HERC2-204ENST00000563945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.15■■□□□ 1.46
HERC2-204ENST00000563945 FBXO22Q8NEZ5 403 aa24.15■■□□□ 1.46
HERC2-204ENST00000563945 PIBF1Q8WXW3 757 aa24.15■■□□□ 1.46
HERC2-204ENST00000563945 LGALS2P05162 132 aa24.14■■□□□ 1.45
HERC2-204ENST00000563945 SMIM10L2AP0DMW4 78 aa24.14■■□□□ 1.45
HERC2-204ENST00000563945 SMIM10L2BP0DMW5 78 aa24.14■■□□□ 1.45
HERC2-204ENST00000563945 MBTPS1Q14703 1052 aa24.14■■□□□ 1.45
HERC2-204ENST00000563945 GPKOWQ92917 476 aaPredicted RBP eCLIP24.14■■□□□ 1.45
HERC2-204ENST00000563945 CUL5Q93034 780 aa24.14■■□□□ 1.45
HERC2-204ENST00000563945 CYP21A2P08686 494 aa24.13■■□□□ 1.45
HERC2-204ENST00000563945 HIC1Q14526 733 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms