RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CELF3Q5SZQ8 465 aaKnown RBP15.06■□□□□ 0
SF3B3-202ENST00000562722 FAM117BQ6P1L5 589 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 SPRED2Q7Z698 418 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 RALYLQ86SE5 291 aaKnown RBP15.06■□□□□ 0
SF3B3-202ENST00000562722 ZFP91Q96JP5 570 aaPredicted RBP15.06■□□□□ 0
SF3B3-202ENST00000562722 PIGSQ96S52 555 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 IL25Q9H293 177 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 MLXIPQ9HAP2 919 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 MAP3K20Q9NYL2 800 aaKnown RBP15.06■□□□□ 0
SF3B3-202ENST00000562722 COG5Q9UP83 839 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 ABHD14A-ACY1A0A1B0GW23 586 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 PALM3A6NDB9 673 aaPredicted RBP15.05■□□□□ -0
SF3B3-202ENST00000562722 HAS3O00219 553 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 EFCAB14O75071 495 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 PPFIA4O75335 1185 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 RGS20O76081 388 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 CXCL10P02778 98 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 BMP1P13497 986 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 UBA1P22314 1058 aaKnown RBP15.05■□□□□ -0
SF3B3-202ENST00000562722 GHRHRQ02643 423 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 GRM4Q14833 912 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 GPNMBQ14956 572 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 SART3Q15020 963 aaKnown RBP15.05■□□□□ -0
SF3B3-202ENST00000562722 HSDL1Q3SXM5 330 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 ZNF618Q5T7W0 954 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 MYSM1Q5VVJ2 828 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 STOX1Q6ZVD7 989 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 VSIG10LQ86VR7 867 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 IL31RAQ8NI17 732 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 GDPD5Q8WTR4 605 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 RUFY2Q8WXA3 655 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 PIBF1Q8WXW3 757 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 MTMR8Q96EF0 704 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ -0
SF3B3-202ENST00000562722 MYH6P13533 1939 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 KIAA1217Q5T5P2 1943 aa15.05■□□□□ -0
SF3B3-202ENST00000562722 NOP56O00567 594 aaKnown RBP15.04■□□□□ -0
SF3B3-202ENST00000562722 THPOP40225 353 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 WTAPQ15007 396 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 TCTN1Q2MV58 587 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 TTC22Q5TAA0 569 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 SAMD3Q8N6K7 520 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 WNT8BQ93098 351 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 HLA-CQ95604 372 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 RAD9AQ99638 391 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 MUC3AQ02505 3323 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 CHD7Q9P2D1 2997 aa15.04■□□□□ -0
SF3B3-202ENST00000562722 EMSYQ7Z589 1322 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 C17orf102A2RUQ5 167 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 RSPH10B2B2RC85 870 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 LGR5O75473 907 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 GJB5O95377 273 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 RSPH10BP0C881 870 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 TGFB3P10600 412 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 SP2Q02086 613 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 GNPTABQ3T906 1256 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 CATIPQ7Z7H3 387 aa15.03■□□□□ -0
SF3B3-202ENST00000562722 GPKOWQ92917 476 aaPredicted RBP eCLIP15.03■□□□□ -0
SF3B3-202ENST00000562722 TGS1Q96RS0 853 aaKnown RBP15.03■□□□□ -0
SF3B3-202ENST00000562722 TET1Q8NFU7 2136 aa15.02■□□□□ -0
SF3B3-202ENST00000562722 TRIP12Q14669 1992 aaPredicted RBP15.02■□□□□ -0
SF3B3-202ENST00000562722 PNMA6FA0A0J9YX94 578 aa15.02■□□□□ -0
SF3B3-202ENST00000562722 AMHP03971 560 aa15.02■□□□□ -0
SF3B3-202ENST00000562722 CYP21A2P08686 494 aa15.02■□□□□ -0
SF3B3-202ENST00000562722 HOXD8P13378 290 aaPredicted RBP15.02■□□□□ -0
SF3B3-202ENST00000562722 GSPT1P15170 499 aaKnown RBP15.02■□□□□ -0
SF3B3-202ENST00000562722 TRIM71Q2Q1W2 868 aaKnown RBP15.02■□□□□ -0
SF3B3-202ENST00000562722 NCOA7Q8NI08 942 aa15.02■□□□□ -0
SF3B3-202ENST00000562722 ATP6V0A1Q93050 837 aa15.02■□□□□ -0
SF3B3-202ENST00000562722 C16orf70Q9BSU1 422 aa15.02■□□□□ -0
SF3B3-202ENST00000562722 RIOX1Q9H6W3 641 aa15.02■□□□□ -0
SF3B3-202ENST00000562722 RAPGEFL1Q9UHV5 662 aa15.02■□□□□ -0
SF3B3-202ENST00000562722 PRRC2BQ5JSZ5 2229 aaKnown RBP15.02□□□□□ -0.01
SF3B3-202ENST00000562722 LINC01553A4QN01 128 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 H3BRB1 525 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 RBAK-RBAKDNI3L0D1 243 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 LPXNO60711 386 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 LGALS2P05162 132 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 CTSHP09668 335 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 SMIM10L2AP0DMW4 78 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 SMIM10L2BP0DMW5 78 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 PDE4AP27815 886 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 PTH1RQ03431 593 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 HIC1Q14526 733 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 MBTPS1Q14703 1052 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 SLC35G1Q2M3R5 365 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 TRAF7Q6Q0C0 670 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 SERINC5Q86VE9 423 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 MYOCDQ8IZQ8 938 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 C1QTNF1Q9BXJ1 281 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 TUT1Q9H6E5 874 aaKnown RBP15.01□□□□□ -0.01
SF3B3-202ENST00000562722 SENP2Q9HC62 589 aa15.01□□□□□ -0.01
SF3B3-202ENST00000562722 COL4A4P53420 1690 aaPredicted RBP15□□□□□ -0.01
SF3B3-202ENST00000562722 TCF20Q9UGU0 1960 aaKnown RBP15□□□□□ -0.01
SF3B3-202ENST00000562722 E7EWF7 191 aa15□□□□□ -0.01
SF3B3-202ENST00000562722 CYTH3O43739 400 aa15□□□□□ -0.01
SF3B3-202ENST00000562722 CHMLP26374 656 aa15□□□□□ -0.01
SF3B3-202ENST00000562722 ERVK-21P61565 698 aa15□□□□□ -0.01
SF3B3-202ENST00000562722 SP4Q02446 784 aa15□□□□□ -0.01
SF3B3-202ENST00000562722 NEDD9Q14511 834 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms