RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SCRN1Q12765 414 aa5.28□□□□□ -1.56
HDGFL3-202ENST00000562702 COL9A2Q14055 689 aaPredicted RBP5.28□□□□□ -1.56
HDGFL3-202ENST00000562702 DPF3Q92784 378 aa5.28□□□□□ -1.56
HDGFL3-202ENST00000562702 WWC2-AS2Q96NR7 200 aa5.28□□□□□ -1.56
HDGFL3-202ENST00000562702 CSRNP2Q9H175 543 aa5.28□□□□□ -1.56
HDGFL3-202ENST00000562702 SEC61A2Q9H9S3 476 aa5.28□□□□□ -1.56
HDGFL3-202ENST00000562702 DTLQ9NZJ0 730 aa5.28□□□□□ -1.56
HDGFL3-202ENST00000562702 ZNF652Q9Y2D9 606 aa5.28□□□□□ -1.56
HDGFL3-202ENST00000562702 TIMM13Q9Y5L4 95 aaPredicted RBP5.28□□□□□ -1.56
HDGFL3-202ENST00000562702 NOP56O00567 594 aaKnown RBP5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 HGSO14964 777 aaPredicted RBP5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 PPFIA2O75334 1257 aa5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 KCNH1O95259 989 aa5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 MCM7P33993 719 aa5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 MLLT6P55198 1093 aaPredicted RBP5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 NRN1LQ496H8 165 aa5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 CEP68Q76N32 757 aa5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 RALYLQ86SE5 291 aaKnown RBP5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 TMEM87AQ8NBN3 555 aa5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 GIMAP8Q8ND71 665 aaPredicted RBP5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 COPS5Q92905 334 aa5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 CHFRQ96EP1 664 aa5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 PODXL2Q9NZ53 605 aa5.27□□□□□ -1.57
HDGFL3-202ENST00000562702 ANKRD34BA5PLL1 514 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 ZNF202O95125 648 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 VAMP1P23763 118 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 MIIPQ5JXC2 388 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 RNF207Q6ZRF8 634 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 IFNL2Q8IZJ0 200 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 C19orf47Q8N9M1 422 aaKnown RBP5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 OR6P1Q8NGX9 317 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 TMEM169Q96HH4 297 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 ADOQ96SZ5 270 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 GPRC5CQ9NQ84 441 aa5.26□□□□□ -1.57
HDGFL3-202ENST00000562702 MAFKO60675 156 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 FPR2P25090 351 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 EIF6P56537 245 aaKnown RBP5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 ZNF568Q3ZCX4 644 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 E4F1Q66K89 784 aaPredicted RBP5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 MBLAC2Q68D91 279 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 TEPPQ6URK8 271 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 ZNF575Q86XF7 245 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 AMER2Q8N7J2 671 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 ZCCHC14Q8WYQ9 949 aaKnown RBP5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 SPATA32Q96LK8 384 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 LMF1Q96S06 567 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 CEP89Q96ST8 783 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 APBA2Q99767 749 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 PTPN18Q99952 460 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 BACH2Q9BYV9 841 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 MEGF9Q9H1U4 602 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 ADAM29Q9UKF5 820 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 PCDHB10Q9UN67 800 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 PCDHB4Q9Y5E5 795 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 X6R8D5 127 aa5.25□□□□□ -1.57
HDGFL3-202ENST00000562702 ZNF76P36508 570 aa5.24□□□□□ -1.57
HDGFL3-202ENST00000562702 DPTQ07507 201 aa5.24□□□□□ -1.57
HDGFL3-202ENST00000562702 BVESQ8NE79 360 aa5.24□□□□□ -1.57
HDGFL3-202ENST00000562702 MRRFQ96E11 262 aaKnown RBP5.24□□□□□ -1.57
HDGFL3-202ENST00000562702 CYP26B1Q9NR63 512 aa5.24□□□□□ -1.57
HDGFL3-202ENST00000562702 METTL5Q9NRN9 209 aaKnown RBP5.24□□□□□ -1.57
HDGFL3-202ENST00000562702 EMC9Q9Y3B6 208 aa5.24□□□□□ -1.57
HDGFL3-202ENST00000562702 SCAMP3O14828 347 aaKnown RBP5.23□□□□□ -1.57
HDGFL3-202ENST00000562702 RECKO95980 971 aa5.23□□□□□ -1.57
HDGFL3-202ENST00000562702 KCNAB2Q13303 367 aa5.23□□□□□ -1.57
HDGFL3-202ENST00000562702 PPP2R5EQ16537 467 aa5.23□□□□□ -1.57
HDGFL3-202ENST00000562702 INF2Q27J81 1249 aa5.23□□□□□ -1.57
HDGFL3-202ENST00000562702 STEAP3Q658P3 488 aa5.23□□□□□ -1.57
HDGFL3-202ENST00000562702 Q8N1Y9 231 aa5.23□□□□□ -1.57
HDGFL3-202ENST00000562702 DIO2Q92813 273 aa5.23□□□□□ -1.57
HDGFL3-202ENST00000562702 TRIM8Q9BZR9 551 aa5.23□□□□□ -1.57
HDGFL3-202ENST00000562702 A0A1W2PQH9 124 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 DGKIO75912 1065 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 FBXO21O94952 628 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 CHGBP05060 677 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 BCL6P41182 706 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 ZNF143P52747 638 aaPredicted RBP5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 INHBCP55103 352 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 PTH1RQ03431 593 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 LSM12Q3MHD2 195 aaKnown RBP5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 USP39Q53GS9 565 aaKnown RBP5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 TCTN3Q6NUS6 607 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 KIAA1211LQ6NV74 962 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 CCDC81Q6ZN84 652 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 PHOSPHO1Q8TCT1 267 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 PPP1R14AQ96A00 147 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 ZNF503Q96F45 646 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 CHAMP1Q96JM3 812 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 GNRHR2Q96P88 292 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 LRRC37BQ96QE4 947 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 ZFR2Q9UPR6 939 aaKnown RBP5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 SLC4A7Q9Y6M7 1214 aa5.22□□□□□ -1.57
HDGFL3-202ENST00000562702 TCRBV5S2A0A599 114 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 H7BY64 318 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 MEFVO15553 781 aaPredicted RBP5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 CNOT4O95628 575 aaKnown RBP5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 COMTP21964 271 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 TGM1P22735 817 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 FANCCQ00597 558 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 LDLRAD1Q5T700 205 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms