RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 PFKFB3Q16875 520 aaPredicted RBP21.43■■□□□ 1.02
PKD1-223ENST00000561668 NBPF20Q3BBV1 942 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 CELF3Q5SZQ8 465 aaKnown RBP21.43■■□□□ 1.02
PKD1-223ENST00000561668 WWC2Q6AWC2 1192 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 PPP1R18Q6NYC8 613 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 TMEM199Q8N511 208 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 SPATA33Q96N06 139 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 TRPV6Q9H1D0 765 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 TBX21Q9UL17 535 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 GRIN2DO15399 1336 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 SMCO2A6NFE2 343 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 PPFIA4O75335 1185 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 GGPS1O95749 300 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 ITGB8P26012 769 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 ADCY7P51828 1080 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 CCT2P78371 535 aaKnown RBP21.42■■□□□ 1.02
PKD1-223ENST00000561668 MRPS9P82933 396 aaKnown RBP21.42■■□□□ 1.02
PKD1-223ENST00000561668 NEDD9Q14511 834 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 FRMPD4Q14CM0 1322 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 MYSM1Q5VVJ2 828 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 MFSD5Q6N075 450 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 NFRKBQ6P4R8 1299 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 PPTC7Q8NI37 304 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 LARP6Q9BRS8 491 aaKnown RBP21.42■■□□□ 1.02
PKD1-223ENST00000561668 UPF2Q9HAU5 1272 aaKnown RBP21.42■■□□□ 1.02
PKD1-223ENST00000561668 NCOA5Q9HCD5 579 aaKnown RBP21.42■■□□□ 1.02
PKD1-223ENST00000561668 RIC8AQ9NPQ8 531 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 BARHL2Q9NY43 387 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 PCDHA6Q9UN73 950 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 PCDHA8Q9Y5H6 950 aa21.42■■□□□ 1.02
PKD1-223ENST00000561668 FIBPO43427 364 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 B4GALT4O60513 344 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 SLC34A2O95436 690 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 FOSP01100 380 aaPredicted RBP21.41■■□□□ 1.02
PKD1-223ENST00000561668 PTPN11Q06124 597 aaPredicted RBP21.41■■□□□ 1.02
PKD1-223ENST00000561668 SCRN1Q12765 414 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 UBE2SQ16763 222 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 LRIT3Q3SXY7 679 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 TYW1BQ6NUM6 668 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 CCDC12Q8WUD4 166 aaPredicted RBP21.41■■□□□ 1.02
PKD1-223ENST00000561668 CDHR1Q96JP9 859 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 INPP4AQ96PE3 977 aaPredicted RBP21.41■■□□□ 1.02
PKD1-223ENST00000561668 KATNAL1Q9BW62 490 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 PPP1R12CQ9BZL4 782 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 HIPK3Q9H422 1215 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 NOD1Q9Y239 953 aa21.41■■□□□ 1.02
PKD1-223ENST00000561668 SPATA31C2B4DYI2 1134 aa21.4■■□□□ 1.02
PKD1-223ENST00000561668 STXBP3O00186 592 aa21.4■■□□□ 1.02
PKD1-223ENST00000561668 NOP56O00567 594 aaKnown RBP21.4■■□□□ 1.02
PKD1-223ENST00000561668 SORBS3O60504 671 aa21.4■■□□□ 1.02
PKD1-223ENST00000561668 SCG2P13521 617 aa21.4■■□□□ 1.02
PKD1-223ENST00000561668 ICAM3P32942 547 aa21.4■■□□□ 1.02
PKD1-223ENST00000561668 SP2Q02086 613 aa21.4■■□□□ 1.02
PKD1-223ENST00000561668 ME3Q16798 604 aa21.4■■□□□ 1.02
PKD1-223ENST00000561668 GIMAP8Q8ND71 665 aaPredicted RBP21.4■■□□□ 1.02
PKD1-223ENST00000561668 TRIOBPQ9H2D6 2365 aa21.4■■□□□ 1.02
PKD1-223ENST00000561668 ESYT2A0FGR8 921 aa21.39■■□□□ 1.01
PKD1-223ENST00000561668 CPLX1O14810 134 aa21.39■■□□□ 1.01
PKD1-223ENST00000561668 UBA1P22314 1058 aaKnown RBP21.39■■□□□ 1.01
PKD1-223ENST00000561668 PPIGQ13427 754 aaKnown RBP eCLIP21.39■■□□□ 1.011e-6■■■□□ 14.7
PKD1-223ENST00000561668 RABEP1Q15276 862 aa21.39■■□□□ 1.01
PKD1-223ENST00000561668 SHHQ15465 462 aa21.39■■□□□ 1.01
PKD1-223ENST00000561668 CPLX2Q6PUV4 134 aaKnown RBP21.39■■□□□ 1.01
PKD1-223ENST00000561668 FAM177A1Q8N128 213 aaPredicted RBP21.39■■□□□ 1.01
PKD1-223ENST00000561668 C7orf31Q8N865 590 aa21.39■■□□□ 1.01
PKD1-223ENST00000561668 SLKQ9H2G2 1235 aaPredicted RBP21.39■■□□□ 1.01
PKD1-223ENST00000561668 C6orf50Q9HD87 102 aa21.39■■□□□ 1.01
PKD1-223ENST00000561668 MYH7BA7E2Y1 1941 aa21.38■■□□□ 1.01
PKD1-223ENST00000561668 TRIM22Q8IYM9 498 aa21.38■■□□□ 1.01
PKD1-223ENST00000561668 PHKBQ93100 1093 aa21.38■■□□□ 1.01
PKD1-223ENST00000561668 TRMT13Q9NUP7 481 aaKnown RBP21.38■■□□□ 1.01
PKD1-223ENST00000561668 LTBP2Q14767 1821 aa21.38■■□□□ 1.01
PKD1-223ENST00000561668 MAFGO15525 162 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 CTDNEP1O95476 244 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 GNA11P29992 359 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 CYP2C18P33260 490 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 HSDL1Q3SXM5 330 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 MCTP2Q6DN12 878 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 CYFIP1Q7L576 1253 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 GTF3C6Q969F1 213 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 GPRASP2Q96D09 838 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 SENP7Q9BQF6 1050 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 ALG1Q9BT22 464 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 SLC26A6Q9BXS9 759 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 ZMYND12Q9H0C1 365 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 SH3GLB2Q9NR46 395 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 LIMCH1Q9UPQ0 1083 aa21.37■■□□□ 1.01
PKD1-223ENST00000561668 STK36Q9NRP7 1315 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 LARGE1O95461 756 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 CSF2RAP15509 400 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 CLK2P49760 499 aaKnown RBP21.36■■□□□ 1.01
PKD1-223ENST00000561668 PSEN2P49810 448 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 SSRP1Q08945 709 aaKnown RBP21.36■■□□□ 1.01
PKD1-223ENST00000561668 STK3Q13188 491 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 AP3B2Q13367 1082 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 MTMR1Q13613 665 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 PTGISQ16647 500 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 METTL7BQ6UX53 244 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 RETREG2Q8NC44 543 aa21.36■■□□□ 1.01
PKD1-223ENST00000561668 LRCH3Q96II8 777 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 383.6 ms