RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 PPFIA4O75335 1185 aa20.19■□□□□ 0.82
CRTC3-208ENST00000560098 ARHGEF15O94989 841 aa20.19■□□□□ 0.82
CRTC3-208ENST00000560098 CXCL10P02778 98 aa20.19■□□□□ 0.82
CRTC3-208ENST00000560098 HOXD8P13378 290 aaPredicted RBP20.19■□□□□ 0.82
CRTC3-208ENST00000560098 WDR5P61964 334 aaKnown RBP20.19■□□□□ 0.82
CRTC3-208ENST00000560098 CELF3Q5SZQ8 465 aaKnown RBP20.19■□□□□ 0.82
CRTC3-208ENST00000560098 ARNTL2Q8WYA1 636 aa20.19■□□□□ 0.82
CRTC3-208ENST00000560098 SPATA33Q96N06 139 aa20.19■□□□□ 0.82
CRTC3-208ENST00000560098 GCOM1H8Y6P7 765 aaPredicted RBP20.18■□□□□ 0.82
CRTC3-208ENST00000560098 NBNO60934 754 aa20.18■□□□□ 0.82
CRTC3-208ENST00000560098 GGPS1O95749 300 aa20.18■□□□□ 0.82
CRTC3-208ENST00000560098 POLR2MP0CAP2 368 aa20.18■□□□□ 0.82
CRTC3-208ENST00000560098 TGFB3P10600 412 aa20.18■□□□□ 0.82
CRTC3-208ENST00000560098 PTH1RQ03431 593 aa20.18■□□□□ 0.82
CRTC3-208ENST00000560098 PTK7Q13308 1070 aa20.18■□□□□ 0.82
CRTC3-208ENST00000560098 HSDL1Q3SXM5 330 aa20.18■□□□□ 0.82
CRTC3-208ENST00000560098 CNKSR3Q6P9H4 555 aa20.18■□□□□ 0.82
CRTC3-208ENST00000560098 RALYLQ86SE5 291 aaKnown RBP20.18■□□□□ 0.82
CRTC3-208ENST00000560098 IL31RAQ8NI17 732 aa20.18■□□□□ 0.82
CRTC3-208ENST00000560098 CYTH3O43739 400 aa20.17■□□□□ 0.82
CRTC3-208ENST00000560098 SORBS3O60504 671 aa20.17■□□□□ 0.82
CRTC3-208ENST00000560098 CHMLP26374 656 aa20.17■□□□□ 0.82
CRTC3-208ENST00000560098 CCND2P30279 289 aa20.17■□□□□ 0.82
CRTC3-208ENST00000560098 SKIV2LQ15477 1246 aaKnown RBP20.17■□□□□ 0.82
CRTC3-208ENST00000560098 UHRF1Q96T88 793 aaPredicted RBP20.17■□□□□ 0.82
CRTC3-208ENST00000560098 SENP2Q9HC62 589 aa20.17■□□□□ 0.82
CRTC3-208ENST00000560098 TET1Q8NFU7 2136 aa20.16■□□□□ 0.82
CRTC3-208ENST00000560098 PNMA6FA0A0J9YX94 578 aa20.16■□□□□ 0.82
CRTC3-208ENST00000560098 E7EWF7 191 aa20.16■□□□□ 0.82
CRTC3-208ENST00000560098 UBA1P22314 1058 aaKnown RBP20.16■□□□□ 0.82
CRTC3-208ENST00000560098 SP2Q02086 613 aa20.16■□□□□ 0.82
CRTC3-208ENST00000560098 TROAPQ12815 778 aa20.16■□□□□ 0.82
CRTC3-208ENST00000560098 WTAPQ15007 396 aa20.16■□□□□ 0.82
CRTC3-208ENST00000560098 SART3Q15020 963 aaKnown RBP20.16■□□□□ 0.82
CRTC3-208ENST00000560098 TRIM71Q2Q1W2 868 aaKnown RBP20.16■□□□□ 0.82
CRTC3-208ENST00000560098 FCHSD1Q86WN1 690 aa20.16■□□□□ 0.82
CRTC3-208ENST00000560098 NCOA7Q8NI08 942 aa20.16■□□□□ 0.82
CRTC3-208ENST00000560098 ZBED2Q9BTP6 218 aa20.16■□□□□ 0.82
CRTC3-208ENST00000560098 TRIP12Q14669 1992 aaPredicted RBP20.15■□□□□ 0.82
CRTC3-208ENST00000560098 ABHD14A-ACY1A0A1B0GW23 586 aa20.15■□□□□ 0.82
CRTC3-208ENST00000560098 DEFB103AP81534 67 aa20.15■□□□□ 0.82
CRTC3-208ENST00000560098 ZNF200P98182 395 aaPredicted RBP20.15■□□□□ 0.82
CRTC3-208ENST00000560098 ZNF618Q5T7W0 954 aa20.15■□□□□ 0.82
CRTC3-208ENST00000560098 TMCO2Q7Z6W1 182 aaPredicted RBP20.15■□□□□ 0.82
CRTC3-208ENST00000560098 WNT8BQ93098 351 aa20.15■□□□□ 0.82
CRTC3-208ENST00000560098 ZFP91Q96JP5 570 aaPredicted RBP20.15■□□□□ 0.82
CRTC3-208ENST00000560098 MLXIPQ9HAP2 919 aa20.15■□□□□ 0.82
CRTC3-208ENST00000560098 TAF6LQ9Y6J9 622 aa20.15■□□□□ 0.82
CRTC3-208ENST00000560098 LCHNA4D1U4 455 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 EFCAB14O75071 495 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 TFF2Q03403 129 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 IKBKEQ14164 716 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 HIC1Q14526 733 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 AAK1Q2M2I8 961 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 TCTN1Q2MV58 587 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 KRT40Q6A162 431 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 TRAF7Q6Q0C0 670 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 CATIPQ7Z7H3 387 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 GPKOWQ92917 476 aaPredicted RBP eCLIP20.14■□□□□ 0.81
CRTC3-208ENST00000560098 C16orf70Q9BSU1 422 aa20.14■□□□□ 0.81
CRTC3-208ENST00000560098 SUPT16HQ9Y5B9 1047 aaKnown RBP20.14■□□□□ 0.81
CRTC3-208ENST00000560098 SGSM2O43147 1006 aa20.13■□□□□ 0.81
CRTC3-208ENST00000560098 GJB5O95377 273 aa20.13■□□□□ 0.81
CRTC3-208ENST00000560098 BMP1P13497 986 aa20.13■□□□□ 0.81
CRTC3-208ENST00000560098 GRB10Q13322 594 aa20.13■□□□□ 0.81
CRTC3-208ENST00000560098 SPRED2Q7Z698 418 aa20.13■□□□□ 0.81
CRTC3-208ENST00000560098 MBTPS1Q14703 1052 aa20.12■□□□□ 0.81
CRTC3-208ENST00000560098 GNPTABQ3T906 1256 aa20.12■□□□□ 0.81
CRTC3-208ENST00000560098 SERINC5Q86VE9 423 aa20.12■□□□□ 0.81
CRTC3-208ENST00000560098 RAD9AQ99638 391 aa20.12■□□□□ 0.81
CRTC3-208ENST00000560098 H3BRB1 525 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 LPXNO60711 386 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 LGR5O75473 907 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 STAM2O75886 525 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 ANTXR2P58335 489 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
CRTC3-208ENST00000560098 IGDCC4Q8TDY8 1250 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 PIBF1Q8WXW3 757 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 INPP4AQ96PE3 977 aaPredicted RBP20.11■□□□□ 0.81
CRTC3-208ENST00000560098 TUT1Q9H6E5 874 aaKnown RBP20.11■□□□□ 0.81
CRTC3-208ENST00000560098 COG5Q9UP83 839 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 MYH7BA7E2Y1 1941 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 PTPRSQ13332 1948 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 FRMPD4Q14CM0 1322 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 EMSYQ7Z589 1322 aa20.11■□□□□ 0.81
CRTC3-208ENST00000560098 C17orf102A2RUQ5 167 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 NOP56O00567 594 aaKnown RBP20.1■□□□□ 0.81
CRTC3-208ENST00000560098 ICAM3P32942 547 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 THPOP40225 353 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 MB21D2Q8IYB1 491 aaPredicted RBP20.1■□□□□ 0.81
CRTC3-208ENST00000560098 MAP4K1Q92918 833 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 ATP6V0A1Q93050 837 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 MAP3K14Q99558 947 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 BCAS3Q9H6U6 928 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 PRRC2BQ5JSZ5 2229 aaKnown RBP20.1■□□□□ 0.81
CRTC3-208ENST00000560098 RSPH10B2B2RC85 870 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 SPATA31C2B4DYI2 1134 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 LGALS2P05162 132 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 RSPH10BP0C881 870 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 HOXC8P31273 242 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms