RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	MUM1L1	Q5H9M0	696 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	RGMB	Q6NW40	437 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	CNNM4	Q6P4Q7	775 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	KCNK18	Q7Z418	384 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	CTU1	Q7Z7A3	348 aa	Known RBP	10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ATG4C	Q96DT6	458 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	CALML4	Q96GE6	196 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	FAM20A	Q96MK3	541 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	TRIM9	Q9C026	710 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	TANGO6	Q9C0B7	1094 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	FANCL	Q9NW38	375 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	MAP3K20	Q9NYL2	800 aa	Known RBP	10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	STK17A	Q9UEE5	414 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	VAV3	Q9UKW4	847 aa		10.65	□□□□□ -0.71
HNRNPC-223	ENST00000556142	FRMPD4	Q14CM0	1322 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	RLF	Q13129	1914 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SMCHD1	A6NHR9	2005 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	C19orf67	A6NJJ6	358 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	FAM155A	B1AL88	458 aa	Predicted RBP	10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ZBED4	O75132	1171 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	TRPA1	O75762	1119 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	RHOBTB3	O94955	611 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ATP1A3	P13637	1013 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	HMGCS2	P54868	508 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	PRKG1	Q13976	671 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	KRT79	Q5XKE5	535 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ZSCAN30	Q86W11	494 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	MCF2L2	Q86YR7	1114 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SULF1	Q8IWU6	871 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	FAM43A	Q8N2R8	423 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SNX29	Q8TEQ0	813 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	RAD54L	Q92698	747 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	CCDC102A	Q96A19	550 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	RMND1	Q9NWS8	449 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	RNF186	Q9NXI6	227 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	PNMA2	Q9UL42	364 aa		10.64	□□□□□ -0.71
HNRNPC-223	ENST00000556142	MYMK	A6NI61	221 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	MEIS1	O00470	390 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ATP2A1	O14983	1001 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	MED24	O75448	989 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	PSMD10	O75832	226 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ALAS1	P13196	640 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	STAT3	P40763	770 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	OAZ1	P54368	228 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	FANCC	Q00597	558 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	MCM6	Q14566	821 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	COG2	Q14746	738 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	POTEE	Q6S8J3	1075 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	B3GNT9	Q6UX72	402 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	KRT26	Q7Z3Y9	468 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	CPXCR1	Q8N123	301 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SLC5A5	Q92911	643 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	CDCA5	Q96FF9	252 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	UIMC1	Q96RL1	719 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	NRBP1	Q9UHY1	535 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ZKSCAN5	Q9Y2L8	839 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	RIPK3	Q9Y572	518 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	PARP14	Q460N5	1801 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	MYPN	Q86TC9	1320 aa		10.63	□□□□□ -0.71
HNRNPC-223	ENST00000556142	MARCH6	O60337	910 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SPATA31C1	P0DKV0	1188 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	PRCP	P42785	496 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ZNF157	P51786	506 aa	Predicted RBP	10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	TPM4	P67936	248 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	AMPD3	Q01432	767 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	EHHADH	Q08426	723 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	CCDC144B	Q3MJ40	725 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	CEP55	Q53EZ4	464 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	COBLL1	Q53SF7	1204 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SPATA1	Q5VX52	437 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SV2B	Q7L1I2	683 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	OTOP1	Q7RTM1	612 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	APTX	Q7Z2E3	356 aa	Known RBP	10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	TRMT44	Q8IYL2	757 aa	Known RBP	10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ADSSL1	Q8N142	457 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	C2orf69	Q8N8R5	385 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	SPC24	Q8NBT2	197 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	RASSF8	Q8NHQ8	419 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	LARP4B	Q92615	738 aa	Known RBP	10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	TRERF1	Q96PN7	1200 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	XPO4	Q9C0E2	1151 aa	Known RBP	10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	KCNF1	Q9H3M0	494 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	EHMT1	Q9H9B1	1298 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	GBA2	Q9HCG7	927 aa	Predicted RBP	10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	IFNK	Q9P0W0	207 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ZNF214	Q9UL59	606 aa	Predicted RBP	10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	GDA	Q9Y2T3	454 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	RABGAP1	Q9Y3P9	1069 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	NFE2L3	Q9Y4A8	694 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	KDM3A	Q9Y4C1	1321 aa		10.62	□□□□□ -0.71
HNRNPC-223	ENST00000556142	POLR2A	P24928	1970 aa	Known RBP	10.61	□□□□□ -0.71
HNRNPC-223	ENST00000556142	PVALEF	A0A1B0GWK0	134 aa		10.61	□□□□□ -0.71
HNRNPC-223	ENST00000556142	EML1	O00423	815 aa		10.61	□□□□□ -0.71
HNRNPC-223	ENST00000556142	PPP1R12B	O60237	982 aa	Predicted RBP	10.61	□□□□□ -0.71
HNRNPC-223	ENST00000556142	AR	P10275	920 aa		10.61	□□□□□ -0.71
HNRNPC-223	ENST00000556142	ZNF76	P36508	570 aa		10.61	□□□□□ -0.71

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