RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 PDIA3P30101 505 aaKnown RBP13.93□□□□□ -0.18
DDX55-206ENST00000539934 TM4SF4P48230 202 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 SCNN1BP51168 640 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 INHBCP55103 352 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 ANTXR2P58335 489 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 CNGA3Q16281 694 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 GBP7Q8N8V2 638 aaPredicted RBP13.93□□□□□ -0.18
DDX55-206ENST00000539934 AGBL3Q8NEM8 1001 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 GSDMAQ96QA5 445 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 GDPD2Q9HCC8 539 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 LUC7LQ9NQ29 371 aaKnown RBP13.93□□□□□ -0.18
DDX55-206ENST00000539934 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
DDX55-206ENST00000539934 MAST2Q6P0Q8 1798 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 PAPPA2Q9BXP8 1791 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 B4E1Z4 1266 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 WNT10BO00744 389 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 ZFXP17010 805 aaPredicted RBP13.92□□□□□ -0.18
DDX55-206ENST00000539934 PSMD7P51665 324 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 CLCN6P51797 869 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 SH3BGRP55822 239 aaPredicted RBP13.92□□□□□ -0.18
DDX55-206ENST00000539934 FKBP1BP68106 108 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 CTDSPL2Q05D32 466 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 ELF2Q15723 593 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 CEP57L1Q8IYX8 460 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 SLC7A5P1Q8MH63 180 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 CCDC68Q9H2F9 335 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 RTEL1Q9NZ71 1219 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 TUBGCP4Q9UGJ1 667 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 KLF18A0A0U1RQI7 1052 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 USP17L3A6NCW0 530 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 USP17L4A6NCW7 530 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 ENO4A6NNW6 628 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 MBD3O95983 291 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 TMEM62Q0P6H9 643 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 TSR1Q2NL82 804 aaKnown RBP13.92□□□□□ -0.18
DDX55-206ENST00000539934 CC2D1AQ6P1N0 951 aaPredicted RBP13.92□□□□□ -0.18
DDX55-206ENST00000539934 USP17L1Q7RTZ2 530 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
DDX55-206ENST00000539934 NSUN7Q8NE18 718 aaKnown RBP13.92□□□□□ -0.18
DDX55-206ENST00000539934 SMARCC2Q8TAQ2 1214 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 SDR42E1Q8WUS8 393 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 CENPTQ96BT3 561 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 GORASP1Q9BQQ3 440 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 ATP6V0A4Q9HBG4 840 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 NCOA5Q9HCD5 579 aaKnown RBP13.92□□□□□ -0.18
DDX55-206ENST00000539934 ANGEL1Q9UNK9 670 aaKnown RBP13.92□□□□□ -0.18
DDX55-206ENST00000539934 JAG2Q9Y219 1238 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 CNPY2Q9Y2B0 182 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 UNC80Q8N2C7 3258 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 NEDD4P46934 1319 aa13.92□□□□□ -0.18
DDX55-206ENST00000539934 BAZ2AQ9UIF9 1905 aaKnown RBP13.91□□□□□ -0.18
DDX55-206ENST00000539934 FAM25EA8MYX2 175 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 H3BQV1 296 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 FERP16591 822 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 PAPOLAP51003 745 aaKnown RBP13.91□□□□□ -0.18
DDX55-206ENST00000539934 EVCP57679 992 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 CUL4BQ13620 913 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 ARHGEF6Q15052 776 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 EMC10Q5UCC4 262 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 NEK10Q6ZWH5 1172 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 ZNF804AQ7Z570 1209 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 FERMT3Q86UX7 667 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 MAGEC3Q8TD91 643 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 NSUN4Q96CB9 384 aaKnown RBP13.91□□□□□ -0.18
DDX55-206ENST00000539934 NRDE2Q9H7Z3 1164 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 CNNM2Q9H8M5 875 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 ZNF215Q9UL58 517 aaPredicted RBP13.91□□□□□ -0.18
DDX55-206ENST00000539934 IRS2Q9Y4H2 1338 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 PTPDC1A2A3K4 754 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 TBKBP1A7MCY6 615 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 GOLGA8BA8MQT2 603 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.91□□□□□ -0.18
DDX55-206ENST00000539934 FXR1P51114 621 aaKnown RBP eCLIP13.91□□□□□ -0.18
DDX55-206ENST00000539934 CTAG1AP78358 180 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 CAP1Q01518 475 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 MFSD6Q6ZSS7 791 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 CYB5R4Q7L1T6 521 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 OTOP1Q7RTM1 612 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 RSPH3Q86UC2 560 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 CLMNQ96JQ2 1002 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 RIOK1Q9BRS2 568 aaKnown RBP13.91□□□□□ -0.18
DDX55-206ENST00000539934 MAFFQ9ULX9 164 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 FAN1Q9Y2M0 1017 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 ELP1O95163 1332 aa13.91□□□□□ -0.18
DDX55-206ENST00000539934 FIBPO43427 364 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 ATP2B4P23634 1241 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 PRDX5P30044 214 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
DDX55-206ENST00000539934 SPDYCQ5MJ68 293 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 THEMIS2Q5TEJ8 643 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 TMCO3Q6UWJ1 677 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 SAMD14Q8IZD0 417 aaPredicted RBP13.9□□□□□ -0.18
DDX55-206ENST00000539934 KRT23Q9C075 422 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 ZEB2O60315 1214 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 KDM1AO60341 852 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 CTDNEP1O95476 244 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 CAVIN2O95810 425 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 DESP17661 470 aa13.9□□□□□ -0.18
DDX55-206ENST00000539934 CLCN2P51788 898 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms