RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 FOXB2Q5VYV0 432 aa12□□□□□ -0.49
DDX11-213ENST00000539049 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
DDX11-213ENST00000539049 SNRNP27Q8WVK2 155 aaKnown RBP12□□□□□ -0.49
DDX11-213ENST00000539049 TRIM11Q96F44 468 aa12□□□□□ -0.49
DDX11-213ENST00000539049 KAZALD1Q96I82 304 aa12□□□□□ -0.49
DDX11-213ENST00000539049 PRDM11Q9NQV5 511 aa12□□□□□ -0.49
DDX11-213ENST00000539049 CCDC87Q9NVE4 849 aa12□□□□□ -0.49
DDX11-213ENST00000539049 CIDEBQ9UHD4 219 aa12□□□□□ -0.49
DDX11-213ENST00000539049 INTUQ9ULD6 942 aa12□□□□□ -0.49
DDX11-213ENST00000539049 CTNND1O60716 968 aaKnown RBP11.99□□□□□ -0.49
DDX11-213ENST00000539049 UBOX5O94941 541 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 KRT9P35527 623 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 TRIM29Q14134 588 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 ITIH4Q14624 930 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 MUM1Q2TAK8 710 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 SLC44A4Q53GD3 710 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 IRGCQ6NXR0 463 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 EXOC3L1Q86VI1 746 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 ANKLE2Q86XL3 938 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 ARHGAP18Q8N392 663 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 FNBP4Q8N3X1 1017 aaPredicted RBP11.99□□□□□ -0.49
DDX11-213ENST00000539049 CCDC24Q8N4L8 307 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 DNAJC9Q8WXX5 260 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 IFT43Q96FT9 208 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 NLRP3Q96P20 1036 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 NR1H4Q96RI1 486 aaPredicted RBP11.99□□□□□ -0.49
DDX11-213ENST00000539049 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 ESYT3A0FGR9 886 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 TNFRSF8P28908 595 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 AFMP43652 599 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 ANO1Q5XXA6 986 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
DDX11-213ENST00000539049 MIGA1Q8NAN2 632 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 TCHPQ9BT92 498 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 FAM192AQ9GZU8 254 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 RMND1Q9NWS8 449 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 ZMYND8Q9ULU4 1186 aaPredicted RBP11.99□□□□□ -0.49
DDX11-213ENST00000539049 ALDH1L1O75891 902 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 BAG3O95817 575 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 PAEPP09466 180 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 ACADSP16219 412 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 FECHP22830 423 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 PEX5P50542 639 aa11.99□□□□□ -0.49
DDX11-213ENST00000539049 FOXP4Q8IVH2 680 aaPredicted RBP11.99□□□□□ -0.49
DDX11-213ENST00000539049 REXO2Q9Y3B8 237 aaKnown RBP11.99□□□□□ -0.49
DDX11-213ENST00000539049 B4E1Z4 1266 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 PAFAH1B1P43034 410 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 BIRC3Q13489 604 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 SLC9C2Q5TAH2 1124 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 SPTY2D1Q68D10 685 aaPredicted RBP11.98□□□□□ -0.49
DDX11-213ENST00000539049 GIGYF2Q6Y7W6 1299 aaKnown RBP11.98□□□□□ -0.49
DDX11-213ENST00000539049 UCMAQ8WVF2 138 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 WDR60Q8WVS4 1066 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 CTAGE1Q96RT6 745 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 CHP1Q99653 195 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 SLC26A6Q9BXS9 759 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 GPCPD1Q9NPB8 672 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 ABCF3Q9NUQ8 709 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 AFF2P51816 1311 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 UBR1Q8IWV7 1749 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 MACROD2A1Z1Q3 448 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 ATF3P18847 181 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 KCNA3P22001 575 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 ZNF131P52739 623 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 PHEXP78562 749 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 CCNJLQ8IV13 435 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 GRAMD1CQ8IYS0 662 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 MREGQ8N565 214 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 PTPRN2Q92932 1015 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 EPB41L5Q9HCM4 733 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 TRIM43BA6NCK2 446 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 E7EWF7 191 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 HOXD12P35452 270 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 ZAP70P43403 619 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 CACNA2D1P54289 1103 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 SH3BGRP55822 239 aaPredicted RBP11.98□□□□□ -0.49
DDX11-213ENST00000539049 ITIH3Q06033 890 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
DDX11-213ENST00000539049 LDHAL6AQ6ZMR3 332 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 DHX32Q7L7V1 743 aaKnown RBP11.98□□□□□ -0.49
DDX11-213ENST00000539049 CREG2Q8IUH2 290 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 SLC15A3Q8IY34 581 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 ELAC2Q9BQ52 826 aaKnown RBP11.98□□□□□ -0.49
DDX11-213ENST00000539049 ADD3Q9UEY8 706 aaKnown RBP11.98□□□□□ -0.49
DDX11-213ENST00000539049 MAN1B1Q9UKM7 699 aa11.98□□□□□ -0.49
DDX11-213ENST00000539049 NOVA2Q9UNW9 492 aaKnown RBP11.98□□□□□ -0.49
DDX11-213ENST00000539049 DIP2AQ14689 1571 aa11.97□□□□□ -0.49
DDX11-213ENST00000539049 ZNF213O14771 459 aa11.97□□□□□ -0.49
DDX11-213ENST00000539049 CTDNEP1O95476 244 aa11.97□□□□□ -0.49
DDX11-213ENST00000539049 CDC25AP30304 524 aa11.97□□□□□ -0.49
DDX11-213ENST00000539049 PLOD1Q02809 727 aaPredicted RBP11.97□□□□□ -0.49
DDX11-213ENST00000539049 CMPK2Q5EBM0 449 aa11.97□□□□□ -0.49
DDX11-213ENST00000539049 ZNF554Q86TJ5 538 aa11.97□□□□□ -0.49
DDX11-213ENST00000539049 XPO6Q96QU8 1125 aaKnown RBP11.97□□□□□ -0.49
DDX11-213ENST00000539049 PSMB7Q99436 277 aa11.97□□□□□ -0.49
DDX11-213ENST00000539049 LUC7LQ9NQ29 371 aaKnown RBP11.97□□□□□ -0.49
DDX11-213ENST00000539049 CTTNBP2NLQ9P2B4 639 aa11.97□□□□□ -0.49
DDX11-213ENST00000539049 CNOT8Q9UFF9 292 aaKnown RBP11.97□□□□□ -0.49
DDX11-213ENST00000539049 GGT7Q9UJ14 662 aa11.97□□□□□ -0.49
DDX11-213ENST00000539049 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms