RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 POLRMTO00411 1230 aaKnown RBP19.85■□□□□ 0.77
RAB40C-203ENST00000535977 CYLC1P35663 651 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-203ENST00000535977 ANKRD40Q6AI12 368 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 NCAPH2Q6IBW4 605 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 UNC13DQ70J99 1090 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 ZSCAN29Q8IWY8 852 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-203ENST00000535977 SLF1Q9BQI6 1058 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 A0A1W2PQJ5 194 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 H0YHG0 523 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 TXKP42681 527 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 ZBED6P86452 979 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 CDK17Q00537 523 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 PSMD2Q13200 908 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 FKBP15Q5T1M5 1219 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 CENPPQ6IPU0 288 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 COG1Q8WTW3 980 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 N4BP2L2Q92802 583 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-203ENST00000535977 FAXDC2Q96IV6 333 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 ERGIC2Q96RQ1 377 aa19.85■□□□□ 0.77
RAB40C-203ENST00000535977 ZC3H12CQ9C0D7 883 aaKnown RBP19.85■□□□□ 0.77
RAB40C-203ENST00000535977 GOLGA6CA6NDK9 693 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 GOLGA6DP0CG33 693 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 MTIF2P46199 727 aaKnown RBP19.84■□□□□ 0.77
RAB40C-203ENST00000535977 ZNF543Q08ER8 600 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 STK4Q13043 487 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 CNOT6LQ96LI5 555 aaKnown RBP19.84■□□□□ 0.77
RAB40C-203ENST00000535977 CAPS2Q9BXY5 557 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 GOLGA6AQ9NYA3 693 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 GRIN2DO15399 1336 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 LTBP1Q14766 1721 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 AGPSO00116 658 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 EIF3HO15372 352 aaKnown RBP eCLIP19.84■□□□□ 0.77
RAB40C-203ENST00000535977 SLC26A4O43511 780 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 ABL1P00519 1130 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 GCFC2P16383 781 aaKnown RBP19.84■□□□□ 0.77
RAB40C-203ENST00000535977 TRIM21P19474 475 aaKnown RBP19.84■□□□□ 0.77
RAB40C-203ENST00000535977 MRPL12P52815 198 aaKnown RBP19.84■□□□□ 0.77
RAB40C-203ENST00000535977 SEPT2Q15019 361 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 KRT79Q5XKE5 535 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 CHP1Q99653 195 aa19.84■□□□□ 0.77
RAB40C-203ENST00000535977 B4DLN1 442 aa19.83■□□□□ 0.77
RAB40C-203ENST00000535977 IPO7O95373 1038 aaKnown RBP19.83■□□□□ 0.77
RAB40C-203ENST00000535977 HLA-DOAP06340 250 aa19.83■□□□□ 0.77
RAB40C-203ENST00000535977 PPFIA1Q13136 1202 aa19.83■□□□□ 0.77
RAB40C-203ENST00000535977 GRB10Q13322 594 aa19.83■□□□□ 0.77
RAB40C-203ENST00000535977 HHIPL2Q6UWX4 724 aa19.83■□□□□ 0.77
RAB40C-203ENST00000535977 DPP8Q6V1X1 898 aaPredicted RBP19.83■□□□□ 0.77
RAB40C-203ENST00000535977 LARP4BQ92615 738 aaKnown RBP19.83■□□□□ 0.77
RAB40C-203ENST00000535977 CCDC17Q96LX7 622 aa19.83■□□□□ 0.77
RAB40C-203ENST00000535977 NOC4LQ9BVI4 516 aaKnown RBP19.83■□□□□ 0.77
RAB40C-203ENST00000535977 TTYH3Q9C0H2 523 aa19.83■□□□□ 0.77
RAB40C-203ENST00000535977 FRMPD2Q68DX3 1309 aaPredicted RBP19.83■□□□□ 0.77
RAB40C-203ENST00000535977 AKR1B1P15121 316 aa19.83■□□□□ 0.76
RAB40C-203ENST00000535977 RDXP35241 583 aaKnown RBP19.83■□□□□ 0.76
RAB40C-203ENST00000535977 RNF217Q8TC41 542 aa19.83■□□□□ 0.76
RAB40C-203ENST00000535977 VEZTQ9HBM0 779 aa19.83■□□□□ 0.76
RAB40C-203ENST00000535977 TMEM260Q9NX78 707 aa19.83■□□□□ 0.76
RAB40C-203ENST00000535977 GNGT1P63211 74 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 PICALMQ13492 652 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 GUF1Q8N442 669 aaKnown RBP19.82■□□□□ 0.76
RAB40C-203ENST00000535977 SRCAPQ6ZRS2 3230 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 PSMD14O00487 310 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 CHUKO15111 745 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 USP14P54578 494 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 LRRC63Q05C16 580 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 TTC19Q6DKK2 380 aaPredicted RBP19.82■□□□□ 0.76
RAB40C-203ENST00000535977 CUL5Q93034 780 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 COA7Q96BR5 231 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 CRACR2AQ9BSW2 395 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 BLOC1S4Q9NUP1 217 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 USP40Q9NVE5 1235 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 QSER1Q2KHR3 1735 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 KRT86O43790 486 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 PAX7P23759 505 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 NF2P35240 595 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 PREPLQ4J6C6 727 aaPredicted RBP19.82■□□□□ 0.76
RAB40C-203ENST00000535977 JMJD4Q9H9V9 463 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 MYO6Q9UM54 1294 aa19.82■□□□□ 0.76
RAB40C-203ENST00000535977 NEBLO76041 1014 aa19.81■□□□□ 0.76
RAB40C-203ENST00000535977 TRIM37O94972 964 aa19.81■□□□□ 0.76
RAB40C-203ENST00000535977 FSBPO95073 299 aa19.81■□□□□ 0.76
RAB40C-203ENST00000535977 WDR59Q6PJI9 974 aa19.81■□□□□ 0.76
RAB40C-203ENST00000535977 ADGRF4Q8IZF3 695 aa19.81■□□□□ 0.76
RAB40C-203ENST00000535977 LRRC47Q8N1G4 583 aaKnown RBP19.81■□□□□ 0.76
RAB40C-203ENST00000535977 RAD54LQ92698 747 aa19.81■□□□□ 0.76
RAB40C-203ENST00000535977 TMX4Q9H1E5 349 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-203ENST00000535977 FCER1AP12319 257 aa19.81■□□□□ 0.76
RAB40C-203ENST00000535977 CLK2P49760 499 aaKnown RBP19.81■□□□□ 0.76
RAB40C-203ENST00000535977 CCDC84Q86UT8 332 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-203ENST00000535977 PNMA5Q96PV4 448 aa19.81■□□□□ 0.76
RAB40C-203ENST00000535977 GPCPD1Q9NPB8 672 aa19.81■□□□□ 0.76
RAB40C-203ENST00000535977 ALDH1B1P30837 517 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 ATP2B2Q01814 1243 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 GSPT2Q8IYD1 628 aaKnown RBP19.8■□□□□ 0.76
RAB40C-203ENST00000535977 OTUD6BQ8N6M0 293 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 KIAA0895Q8NCT3 520 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 MTMR8Q96EF0 704 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 SLC24A3Q9HC58 644 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 REXO2Q9Y3B8 237 aaKnown RBP19.8■□□□□ 0.76
RAB40C-203ENST00000535977 MYMKA6NI61 221 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms