RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 SERTAD1Q9UHV2 236 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 GGT7Q9UJ14 662 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 CAPN6Q9Y6Q1 641 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 MAP3K15Q6ZN16 1313 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 NCAPD2Q15021 1401 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 MARF1Q9Y4F3 1742 aaKnown RBP8.52□□□□□ -1.05
PTPRK-219ENST00000531050 SIGLEC16A6NMB1 481 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 YY1P25490 414 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 HOXD12P35452 270 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 SULT2A1Q06520 285 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 TTC39AQ5SRH9 613 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 ZNF365Q70YC5 407 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 MIGA2Q7L4E1 593 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 AACSQ86V21 672 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 HOOK3Q86VS8 718 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 STK32AQ8WU08 396 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 ATXN2LQ8WWM7 1075 aaKnown RBP8.52□□□□□ -1.05
PTPRK-219ENST00000531050 RNF25Q96BH1 459 aaPredicted RBP8.52□□□□□ -1.05
PTPRK-219ENST00000531050 DDX27Q96GQ7 796 aaKnown RBP8.52□□□□□ -1.05
PTPRK-219ENST00000531050 SPATA16Q9BXB7 569 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 PUS3Q9BZE2 481 aaKnown RBP8.52□□□□□ -1.05
PTPRK-219ENST00000531050 CNOT10Q9H9A5 744 aaKnown RBP8.52□□□□□ -1.05
PTPRK-219ENST00000531050 LRRC4CQ9HCJ2 640 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.05
PTPRK-219ENST00000531050 ETNK2Q9NVF9 386 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 RMND1Q9NWS8 449 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 CHMP2BQ9UQN3 213 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 ATP8A1Q9Y2Q0 1164 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 SH3GLB1Q9Y371 365 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 HYOU1Q9Y4L1 999 aa8.52□□□□□ -1.05
PTPRK-219ENST00000531050 N4BP2Q86UW6 1770 aaPredicted RBP8.52□□□□□ -1.05
PTPRK-219ENST00000531050 CEP170BQ9Y4F5 1589 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 OAS1P00973 400 aaKnown RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 ZFXP17010 805 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 GM2AP17900 193 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 TCP1P17987 556 aaKnown RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 ECHS1P30084 290 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 PTDSS1P48651 473 aaKnown RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 CEBPAP49715 358 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 ZC2HC1CQ53FD0 456 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 ENDOVQ8N8Q3 282 aaKnown RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 PPP1R14BQ96C90 147 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 ZNF653Q96CK0 615 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 TLCD1Q96CP7 247 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 ZNF333Q96JL9 665 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 IFT74Q96LB3 600 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 GBP5Q96PP8 586 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 KRT23Q9C075 422 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 VPS16Q9H269 839 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 PHAXQ9H814 394 aaKnown RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 HELLSQ9NRZ9 838 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 CYP39A1Q9NYL5 469 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 SAMD15Q9P1V8 674 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 PNMA3Q9UL41 463 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 MAP3K19Q56UN5 1328 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 FER1L4A9Z1Z3 1794 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 USP54Q70EL1 1684 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 FAM208AQ9UK61 1670 aaKnown RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 A0A0J9YVX5 310 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 IDO1P14902 403 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 KCNA3P22001 575 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 COPB1P53618 953 aaKnown RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 HDAC4P56524 1084 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 MEA1Q16626 185 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 ZNF554Q86TJ5 538 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 ARHGAP18Q8N392 663 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 LTV1Q96GA3 475 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-219ENST00000531050 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 TAB2Q9NYJ8 693 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 LRCH1Q9Y2L9 728 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 FLT4P35916 1363 aa8.51□□□□□ -1.05
PTPRK-219ENST00000531050 TRIM43BA6NCK2 446 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 NCK2O43639 380 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 ASLP04424 464 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 HNRNPCP07910 306 aaKnown RBP eCLIP8.5□□□□□ -1.052e-6■■■■□ 19.3
PTPRK-219ENST00000531050 MMEP08473 750 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 ITGA2BP08514 1039 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 CTNNA1P35221 906 aaKnown RBP8.5□□□□□ -1.05
PTPRK-219ENST00000531050 PAFAH1B1P43034 410 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 GSTM4Q03013 218 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 DPYDQ12882 1025 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 DDB1Q16531 1140 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 CLPPQ16740 277 aaPredicted RBP8.5□□□□□ -1.05
PTPRK-219ENST00000531050 TBC1D9BQ66K14 1250 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 GATA6Q92908 595 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 MS4A14Q96JA4 679 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 HIC2Q96JB3 615 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 PPP1R12CQ9BZL4 782 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 BOLA2Q9H3K6 86 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 MLXIPQ9HAP2 919 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 GPCPD1Q9NPB8 672 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 ZNHIT6Q9NWK9 470 aaKnown RBP8.5□□□□□ -1.05
PTPRK-219ENST00000531050 EFR3BQ9Y2G0 817 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 EID1Q9Y6B2 187 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 COMMD3-BMI1R4GMX3 469 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 MST1RQ04912 1400 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 TMEM247A6NEH6 219 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 PPP1R3GB7ZBB8 358 aa8.5□□□□□ -1.05
PTPRK-219ENST00000531050 CETN3O15182 167 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms