RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 IWS1Q96ST2 819 aa13.18□□□□□ -0.3
SPIDR-217ENST00000522117 MTFR1LQ9H019 292 aa13.18□□□□□ -0.3
SPIDR-217ENST00000522117 NHEJ1Q9H9Q4 299 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-217ENST00000522117 LRWD1Q9UFC0 647 aa13.18□□□□□ -0.3
SPIDR-217ENST00000522117 FBXO2Q9UK22 296 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-217ENST00000522117 TRIM33Q9UPN9 1127 aa13.18□□□□□ -0.3
SPIDR-217ENST00000522117 CTNND2Q9UQB3 1225 aa13.18□□□□□ -0.3
SPIDR-217ENST00000522117 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
SPIDR-217ENST00000522117 SHBGP04278 402 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 CYP11B2P19099 503 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 LMNB1P20700 586 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 CALB2P22676 271 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 RAD23BP54727 409 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 UBXN1Q04323 297 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 BTG3Q14201 252 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-217ENST00000522117 MTHFSDQ2M296 383 aaKnown RBP13.17□□□□□ -0.3
SPIDR-217ENST00000522117 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
SPIDR-217ENST00000522117 PBKQ96KB5 322 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 CNOT10Q9H9A5 744 aaKnown RBP13.17□□□□□ -0.3
SPIDR-217ENST00000522117 RNPEPL1Q9HAU8 725 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 RHBDL2Q9NX52 303 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 GGT7Q9UJ14 662 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 GSTA2P09210 222 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 CASP1P29466 404 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 CTNNA1P35221 906 aaKnown RBP13.17□□□□□ -0.3
SPIDR-217ENST00000522117 TSNAXIP1Q2TAA8 658 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 TCP11X2Q5H9J9 407 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 KRT40Q6A162 431 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 EXOC3L1Q86VI1 746 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 SMYD1Q8NB12 490 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 NGDNQ8NEJ9 315 aaKnown RBP13.17□□□□□ -0.3
SPIDR-217ENST00000522117 KLHDC4Q8TBB5 520 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 PTPRN2Q92932 1015 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 TLCD1Q96CP7 247 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 INCENPQ9NQS7 918 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 UTP6Q9NYH9 597 aaKnown RBP13.17□□□□□ -0.3
SPIDR-217ENST00000522117 CTNNAL1Q9UBT7 734 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 LNPEPQ9UIQ6 1025 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 WDR37Q9Y2I8 494 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 NDUFB9Q9Y6M9 179 aa13.17□□□□□ -0.3
SPIDR-217ENST00000522117 MYO5AQ9Y4I1 1855 aaKnown RBP13.17□□□□□ -0.3
SPIDR-217ENST00000522117 PEX11AO75192 247 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 MYBP10242 640 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 ZC3H6P61129 1189 aaKnown RBP13.16□□□□□ -0.3
SPIDR-217ENST00000522117 EPHA10Q5JZY3 1008 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 KANK3Q6NY19 840 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 SLC17A8Q8NDX2 589 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 FBF1Q8TES7 1133 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 KCNJ18B7U540 433 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 OAS1P00973 400 aaKnown RBP13.16□□□□□ -0.3
SPIDR-217ENST00000522117 SPATA31D3P0C874 917 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 TPBGLP0DKB5 382 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 FUT4P22083 530 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 PTPREP23469 700 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 GBP1P32455 592 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 CBX3Q13185 183 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 KCNJ12Q14500 433 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 SPATA31D4Q6ZUB0 917 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 UTP4Q969X6 686 aaKnown RBP13.16□□□□□ -0.3
SPIDR-217ENST00000522117 DUSP9Q99956 384 aaKnown RBP13.16□□□□□ -0.3
SPIDR-217ENST00000522117 TLR10Q9BXR5 811 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 TMEM98Q9Y2Y6 226 aa13.16□□□□□ -0.3
SPIDR-217ENST00000522117 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 GOLGA8BA8MQT2 603 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 PRC1O43663 620 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 NEK9Q8TD19 979 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 ASAP3Q8TDY4 903 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 DYDC1Q8WWB3 177 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 KRT12Q99456 494 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 ALG1Q9BT22 464 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 TIPINQ9BVW5 301 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 SAMD15Q9P1V8 674 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 MARF1Q9Y4F3 1742 aaKnown RBP13.15□□□□□ -0.3
SPIDR-217ENST00000522117 C4AP0C0L4 1744 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 C4BP0C0L5 1744 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 PLEKHG3A1L390 1219 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 SART1O43290 800 aaKnown RBP13.15□□□□□ -0.3
SPIDR-217ENST00000522117 E2F6O75461 281 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 GFPT2O94808 682 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 MMEP08473 750 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 VIL1P09327 827 aaKnown RBP13.15□□□□□ -0.3
SPIDR-217ENST00000522117 CCDC166P0CW27 439 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 CHN1P15882 459 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 PLOD1Q02809 727 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-217ENST00000522117 MCL1Q07820 350 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 IRF5Q13568 498 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 CNPY1Q3B7I2 92 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 MB21D1Q8N884 522 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 ZBTB8BQ8NAP8 495 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-217ENST00000522117 DNAJC9Q8WXX5 260 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 TRAIPQ9BWF2 469 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 SCOCQ9UIL1 159 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 PNMA3Q9UL41 463 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 SLC4A7Q9Y6M7 1214 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
SPIDR-217ENST00000522117 PEAK1Q9H792 1746 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms