RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 C4orf32Q8N8J7 132 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 FOXD4L4Q8WXT5 416 aaPredicted RBP12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 LENG9Q96B70 501 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 INPP4AQ96PE3 977 aaPredicted RBP12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 USP28Q96RU2 1077 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 APBA2Q99767 749 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 MXRA8Q9BRK3 442 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 ARHGAP39Q9C0H5 1083 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 JADE2Q9NQC1 790 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 SRRDQ9UH36 339 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 RCOR1Q9UKL0 485 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 CEP131Q9UPN4 1083 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 PCDHB6Q9Y5E3 794 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 FAM86B1E9PN63 330 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 WNT7AO00755 349 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 CCNT1O60563 726 aaKnown RBP12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 FAM86B2P0C5J1 330 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 ICAM3P32942 547 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 ATP2C1P98194 919 aaPredicted RBP12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 SETQ01105 290 aaPredicted RBP12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 CAP1Q01518 475 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 SLC39A14Q15043 492 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 PTPAQ15257 358 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 ARL6IP4Q66PJ3 421 aaKnown RBP12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 LINC00301Q8NCQ3 95 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 IL31RAQ8NI17 732 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 NPLOC4Q8TAT6 608 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 GPRASP2Q96D09 838 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 CDHR1Q96JP9 859 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 TINF2Q9BSI4 451 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 SCAND2PQ9GZW5 306 aaPredicted RBP12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 KCNMB3Q9NPA1 279 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 NRBP1Q9UHY1 535 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 LRRC37A2A6NM11 1700 aa12.98□□□□□ -0.33
ARFGEF1-202ENST00000517955 PPP6R2O75170 966 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 RGS20O76081 388 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 TGFB3P10600 412 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 ITGB5P18084 799 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 PRPHP41219 470 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 FLT3LGP49771 235 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 PDE4DQ08499 809 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 SF3A1Q15459 793 aaKnown RBP12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 ZNF174Q15697 407 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 KCNV1Q6PIU1 500 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 ARMCX2Q7L311 632 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 HS6ST3Q8IZP7 471 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 CD99L2Q8TCZ2 262 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 FAM20AQ96MK3 541 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 VTA1Q9NP79 307 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 DDX25Q9UHL0 483 aaKnown RBP12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 CLIC4Q9Y696 253 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 KIAA1217Q5T5P2 1943 aa12.97□□□□□ -0.33
ARFGEF1-202ENST00000517955 ELP1O95163 1332 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 RBM47A0AV96 593 aaKnown RBP12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 SPATA31C2B4DYI2 1134 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 SLC37A4O43826 429 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 NEMFO60524 1076 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 TDP2O95551 362 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 MCM7P33993 719 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 ZNF76P36508 570 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 UBXN2AP68543 259 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 PRKCZQ05513 592 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 PTGDRQ13258 359 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 GNPTABQ3T906 1256 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 NLRX1Q86UT6 975 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 FBXO22Q8NEZ5 403 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 CYP2W1Q8TAV3 490 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 ETNPPLQ8TBG4 499 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 KCNG4Q8TDN1 519 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 PXYLP1Q8TE99 480 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 KATNBL1Q9H079 304 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 ABHD16BQ9H3Z7 469 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 GABRQQ9UN88 632 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 ZSWIM8A7E2V4 1837 aa12.96□□□□□ -0.33
ARFGEF1-202ENST00000517955 MCM3APO60318 1980 aa12.96□□□□□ -0.34
ARFGEF1-202ENST00000517955 FIBPO43427 364 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 SNAI1O95863 264 aaPredicted RBP12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 MYCLP12524 364 aaPredicted RBP12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 ATP2B1P20020 1258 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 CYP2B6P20813 491 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 NBR1Q14596 966 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 PRR16Q569H4 304 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 PLA2G4DQ86XP0 818 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 SLFN12Q8IYM2 578 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 HAS1Q92839 578 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 SLC5A5Q92911 643 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 RIT2Q99578 217 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 KCNH7Q9NS40 1196 aa12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 SRPRBQ9Y5M8 271 aaKnown RBP12.95□□□□□ -0.34
ARFGEF1-202ENST00000517955 SPTLC2O15270 562 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms