RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 KIAA2012Q0VF49 1180 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 INF2Q27J81 1249 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 SDE2Q6IQ49 451 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 VHLLQ6RSH7 139 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 APBB1IPQ7Z5R6 666 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 LGI4Q8N135 537 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 COPS5Q92905 334 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 GPRASP2Q96D09 838 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 SAMD11Q96NU1 681 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 ZNF536O15090 1300 aa4.67□□□□□ -1.66
HMGB3P15-201ENST00000507326 MROH6A6NGR9 719 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 C22orf46C9J442 243 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 DDX3XO00571 662 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 SCAMP3O14828 347 aaKnown RBP4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 CREB3O43889 395 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 FPR2P25090 351 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 STAT5AP42229 794 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 NASPP49321 788 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 ITGA1P56199 1179 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 OS9Q13438 667 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 FAM50AQ14320 339 aaKnown RBP4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 FAM26FQ5R3K3 315 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 C9orf131Q5VYM1 1079 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 BORAQ6PGQ7 559 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 FAM124AQ86V42 546 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 ZC3H18Q86VM9 953 aaKnown RBP4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 MIB1Q86YT6 1006 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 CRACR2BQ8N4Y2 399 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 TTC9BQ8N6N2 239 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 TTLL6Q8N841 843 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 TXNDC5Q8NBS9 432 aaKnown RBP4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 BVESQ8NE79 360 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 CHST13Q8NET6 341 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 RASGRP4Q8TDF6 673 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 CPLX3Q8WVH0 158 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 SEC14L1Q92503 715 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 LGR4Q9BXB1 951 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 EMC9Q9Y3B6 208 aa4.66□□□□□ -1.66
HMGB3P15-201ENST00000507326 SBNO2Q9Y2G9 1366 aa4.65□□□□□ -1.66
HMGB3P15-201ENST00000507326 CCDC194A0A1B0GVG4 234 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 NOP56O00567 594 aaKnown RBP4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 PEX14O75381 377 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 RECKO95980 971 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 FSHBP01225 129 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 RBM10P98175 930 aaKnown RBP4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 GTF2IRD2BQ6EKJ0 949 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 POMZP3Q6PJE2 187 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 GLB1LQ6UWU2 654 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 LIMS2Q7Z4I7 341 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 MILR1Q7Z6M3 343 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 GTF2IRD2Q86UP8 949 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 FAM126BQ8IXS8 530 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 PNISRQ8TF01 805 aaKnown RBP4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 PPP1R14AQ96A00 147 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 SHDQ96IW2 340 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 APBA2Q99767 749 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 C1QTNF3Q9BXJ4 246 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 ST6GALNAC2Q9UJ37 374 aa4.65□□□□□ -1.67
HMGB3P15-201ENST00000507326 C1QTNF3-AMACRE9PGA6 284 aa4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 PPP1R12AO14974 1030 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 GTF2F1P35269 517 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 RPL11P62913 178 aaKnown RBP4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 PRR31Q5SQ13 230 aa4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 METTL16Q86W50 562 aaKnown RBP4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 PRPF38AQ8NAV1 312 aaKnown RBP4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 SLC16A11Q8NCK7 471 aa4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 FRS2Q8WU20 508 aa4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 LCORQ96JN0 433 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 YIPF4Q9BSR8 244 aa4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 SSBP3Q9BWW4 388 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 JADE2Q9NQC1 790 aa4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 SRRDQ9UH36 339 aa4.64□□□□□ -1.67
HMGB3P15-201ENST00000507326 NAT2P11245 290 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 SLC6A11P48066 632 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 CASP7P55210 303 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 CYP4F3Q08477 520 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 CR1LQ2VPA4 569 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 PRAMEF18Q5VWM3 479 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 ZNF662Q6ZS27 426 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 CEP68Q76N32 757 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 TRIM59Q8IWR1 403 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 TMTC2Q8N394 836 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 FAM169BQ8N8A8 192 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 NPLOC4Q8TAT6 608 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 DVL3Q92997 716 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 MRGPRX3Q96LB0 322 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 ZSWIM3Q96MP5 696 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 NAP1L4Q99733 375 aaKnown RBP4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 CCSER2Q9H7U1 834 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 CYP26B1Q9NR63 512 aa4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 GEMIN8Q9NWZ8 242 aaKnown RBP4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 TIMM13Q9Y5L4 95 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P15-201ENST00000507326 LAMTOR5O43504 91 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 CYP1A1P04798 512 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 HSD3B2P26439 372 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 BCL6P41182 706 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 GJA8P48165 433 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 NKX3-2P78367 333 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms