RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 CTAGE1Q96RT6 745 aa23.07■■□□□ 1.28
UBE2D3-220ENST00000505307 HDAC6Q9UBN7 1215 aa23.07■■□□□ 1.28
UBE2D3-220ENST00000505307 BAZ2BQ9UIF8 2168 aaKnown RBP23.07■■□□□ 1.28
UBE2D3-220ENST00000505307 KIF28PB7ZC32 967 aa23.06■■□□□ 1.28
UBE2D3-220ENST00000505307 PRC1O43663 620 aa23.06■■□□□ 1.28
UBE2D3-220ENST00000505307 PTK7Q13308 1070 aa23.06■■□□□ 1.28
UBE2D3-220ENST00000505307 CUL5Q93034 780 aa23.06■■□□□ 1.28
UBE2D3-220ENST00000505307 ALG1Q9BT22 464 aa23.06■■□□□ 1.28
UBE2D3-220ENST00000505307 LSG1Q9H089 658 aaKnown RBP23.06■■□□□ 1.28
UBE2D3-220ENST00000505307 MLXIPQ9HAP2 919 aa23.06■■□□□ 1.28
UBE2D3-220ENST00000505307 SEC63Q9UGP8 760 aaKnown RBP23.06■■□□□ 1.28
UBE2D3-220ENST00000505307 FRMPD4Q14CM0 1322 aa23.06■■□□□ 1.28
UBE2D3-220ENST00000505307 VCANP13611 3396 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 CCDC69A6NI79 296 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 ZNF286BP0CG31 522 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 CALM1P0DP23 149 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 CALM2P0DP24 149 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 CALM3P0DP25 149 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 UBA1P22314 1058 aaKnown RBP23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 LIFRP42702 1097 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 HSDL1Q3SXM5 330 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 XRRA1Q6P2D8 792 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 NFXL1Q6ZNB6 911 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 LRRC8DQ7L1W4 858 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 ESYT1Q9BSJ8 1104 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 PRUNE2Q8WUY3 3088 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 TANC1Q9C0D5 1861 aa23.05■■□□□ 1.28
UBE2D3-220ENST00000505307 ICAM3P32942 547 aa23.04■■□□□ 1.28
UBE2D3-220ENST00000505307 SP2Q02086 613 aa23.04■■□□□ 1.28
UBE2D3-220ENST00000505307 NEDD9Q14511 834 aa23.04■■□□□ 1.28
UBE2D3-220ENST00000505307 USP38Q8NB14 1042 aa23.04■■□□□ 1.28
UBE2D3-220ENST00000505307 INPP4AQ96PE3 977 aaPredicted RBP23.04■■□□□ 1.28
UBE2D3-220ENST00000505307 SCN5AQ14524 2016 aa23.04■■□□□ 1.28
UBE2D3-220ENST00000505307 PIK3CDO00329 1044 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 SH2B2O14492 632 aaPredicted RBP23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 SLC27A2O14975 620 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 CKBP12277 381 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 MYOGP15173 224 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 IGFBP4P22692 258 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 KCNJ6P48051 423 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 ADGRE1Q14246 886 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 SMARCC2Q8TAQ2 1214 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 PIBF1Q8WXW3 757 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 PPM1EQ8WY54 764 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 DHX38Q92620 1227 aaKnown RBP23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 CHD9Q3L8U1 2897 aa23.03■■□□□ 1.28
UBE2D3-220ENST00000505307 MYH7BA7E2Y1 1941 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 SPATA31C2B4DYI2 1134 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 FIBPO43427 364 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 EFCAB14O75071 495 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 CXCL10P02778 98 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 MRPS9P82933 396 aaKnown RBP23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 NECTIN1Q15223 517 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 CNKSR3Q6P9H4 555 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 HERC6Q8IVU3 1022 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 C16orf70Q9BSU1 422 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 MYL10Q9BUA6 226 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 GBF1Q92538 1859 aa23.02■■□□□ 1.28
UBE2D3-220ENST00000505307 NOP56O00567 594 aaKnown RBP23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 BMP2KLQ5H9B9 411 aa23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 TJAP1Q5JTD0 557 aa23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 RNF20Q5VTR2 975 aa23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 PCNX4Q63HM2 1172 aa23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 CREB3L3Q68CJ9 461 aa23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 METTL7BQ6UX53 244 aa23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 ATXN2LQ8WWM7 1075 aaKnown RBP23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 USP26Q9BXU7 913 aa23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 SLC12A7Q9Y666 1083 aa23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 TRIP12Q14669 1992 aaPredicted RBP23.01■■□□□ 1.27
UBE2D3-220ENST00000505307 ABHD14A-ACY1A0A1B0GW23 586 aa23■■□□□ 1.27
UBE2D3-220ENST00000505307 H3BRB1 525 aa23■■□□□ 1.27
UBE2D3-220ENST00000505307 CA3P07451 260 aa23■■□□□ 1.27
UBE2D3-220ENST00000505307 GPNMBQ14956 572 aa23■■□□□ 1.27
UBE2D3-220ENST00000505307 SENP7Q9BQF6 1050 aa23■■□□□ 1.27
UBE2D3-220ENST00000505307 TUT1Q9H6E5 874 aaKnown RBP23■■□□□ 1.27
UBE2D3-220ENST00000505307 ANO2Q9NQ90 1003 aa23■■□□□ 1.27
UBE2D3-220ENST00000505307 MEIS2O14770 477 aa22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 SORBS3O60504 671 aa22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 TRIM71Q2Q1W2 868 aaKnown RBP22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 USP17L6PQ6QN14 398 aa22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 CENPQQ7L2Z9 268 aaPredicted RBP22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 NLRX1Q86UT6 975 aa22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 SRBD1Q8N5C6 995 aaKnown RBP22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 GIMAP8Q8ND71 665 aaPredicted RBP22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 GPKOWQ92917 476 aaPredicted RBP eCLIP22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 ZFP91Q96JP5 570 aaPredicted RBP22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 TSPYL2Q9H2G4 693 aaPredicted RBP22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 EMSYQ7Z589 1322 aa22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 TET1Q8NFU7 2136 aa22.99■■□□□ 1.27
UBE2D3-220ENST00000505307 C17orf102A2RUQ5 167 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 NBNO60934 754 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 PLEKHA8P1O95397 391 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 LGALS2P05162 132 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 POU3F3P20264 500 aaPredicted RBP22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 WDR5P61964 334 aaKnown RBP22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 SYNE3Q6ZMZ3 975 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 SERINC5Q86VE9 423 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 SGMS1Q86VZ5 419 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 CDHR1Q96JP9 859 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 PSTPIP2Q9H939 334 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms