RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 RBM47A0AV96 593 aaKnown RBP16.52■□□□□ 0.24
BRCA1-223ENST00000494123 MAFGO15525 162 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 MSCO60682 206 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 TGFB3P10600 412 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 ICAM3P32942 547 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 RESTQ13127 1097 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 PKP1Q13835 747 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 PPP4R3AQ6IN85 833 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 KCNH7Q9NS40 1196 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 PKD2L1Q9P0L9 805 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 IGLV3-22A0A075B6J6 115 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 CYP3A7-CYP3A51PA0A087WV96 503 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 SPATA31C2B4DYI2 1134 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 EDIL3O43854 480 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 RARBP10826 455 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 SMPD1P17405 629 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 CYP3A7P24462 503 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 Q4G0T1 1027 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 DUSP28Q4G0W2 176 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 TTC38Q5R3I4 469 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 ANO1Q5XXA6 986 aa16.52■□□□□ 0.23
BRCA1-223ENST00000494123 DDX20Q9UHI6 824 aaKnown RBP16.52■□□□□ 0.23
BRCA1-223ENST00000494123 NKRFO15226 690 aaKnown RBP eCLIP16.51■□□□□ 0.23
BRCA1-223ENST00000494123 MARCH6O60337 910 aa16.51■□□□□ 0.23
BRCA1-223ENST00000494123 ARIH2O95376 493 aa16.51■□□□□ 0.23
BRCA1-223ENST00000494123 F13A1P00488 732 aa16.51■□□□□ 0.23
BRCA1-223ENST00000494123 ARP10275 920 aa16.51■□□□□ 0.23
BRCA1-223ENST00000494123 MCM7P33993 719 aa16.51■□□□□ 0.23
BRCA1-223ENST00000494123 LY6KQ17RY6 165 aa16.51■□□□□ 0.23
BRCA1-223ENST00000494123 MYSM1Q5VVJ2 828 aa16.51■□□□□ 0.23
BRCA1-223ENST00000494123 CCDC62Q6P9F0 684 aa16.51■□□□□ 0.23
BRCA1-223ENST00000494123 ZNF577Q9BSK1 485 aa16.51■□□□□ 0.23
BRCA1-223ENST00000494123 DDX41Q9UJV9 622 aaKnown RBP16.51■□□□□ 0.23
BRCA1-223ENST00000494123 ADCY6O43306 1168 aa16.5■□□□□ 0.23
BRCA1-223ENST00000494123 SLC37A4O43826 429 aa16.5■□□□□ 0.23
BRCA1-223ENST00000494123 UBA1P22314 1058 aaKnown RBP16.5■□□□□ 0.23
BRCA1-223ENST00000494123 NUCB2P80303 420 aa16.5■□□□□ 0.23
BRCA1-223ENST00000494123 SEMA3FQ13275 785 aa16.5■□□□□ 0.23
BRCA1-223ENST00000494123 ORC2Q13416 577 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-223ENST00000494123 NEDD9Q14511 834 aa16.5■□□□□ 0.23
BRCA1-223ENST00000494123 ZNF174Q15697 407 aa16.5■□□□□ 0.23
BRCA1-223ENST00000494123 GIMAP8Q8ND71 665 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-223ENST00000494123 LENG1Q96BZ8 264 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-223ENST00000494123 MBOAT7Q96N66 472 aa16.5■□□□□ 0.23
BRCA1-223ENST00000494123 SDF4Q9BRK5 362 aa16.5■□□□□ 0.23
BRCA1-223ENST00000494123 TMEM106CQ9BVX2 250 aa16.5■□□□□ 0.23
BRCA1-223ENST00000494123 AGO4Q9HCK5 861 aaKnown RBP16.5■□□□□ 0.23
BRCA1-223ENST00000494123 PAK6Q9NQU5 681 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-223ENST00000494123 SORBS3O60504 671 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 NEMFO60524 1076 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 DUSP11O75319 330 aaKnown RBP16.49■□□□□ 0.23
BRCA1-223ENST00000494123 BRD1O95696 1058 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 GGPS1O95749 300 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 GH1P01241 217 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 TOB1P50616 345 aaPredicted RBP16.49■□□□□ 0.23
BRCA1-223ENST00000494123 NBR1Q14596 966 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 TMEM63BQ5T3F8 832 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 GJC2Q5T442 439 aaPredicted RBP16.49■□□□□ 0.23
BRCA1-223ENST00000494123 TLK2Q86UE8 772 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 DHX37Q8IY37 1157 aaKnown RBP16.49■□□□□ 0.23
BRCA1-223ENST00000494123 OR6J1Q8NGC5 347 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 COPS5Q92905 334 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 LENG9Q96B70 501 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 DEFB118Q96PH6 123 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 UIMC1Q96RL1 719 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 SENP7Q9BQF6 1050 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 AP5M1Q9H0R1 490 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 MLXIPQ9HAP2 919 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 SPC25Q9HBM1 224 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 XPNPEP3Q9NQH7 507 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 TCEAL9Q9UHQ7 104 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 MYH15Q9Y2K3 1946 aa16.49■□□□□ 0.23
BRCA1-223ENST00000494123 IPO5O00410 1097 aaKnown RBP16.48■□□□□ 0.23
BRCA1-223ENST00000494123 WNT7AO00755 349 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 MSH4O15457 936 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 DYNC1LI2O43237 492 aaPredicted RBP16.48■□□□□ 0.23
BRCA1-223ENST00000494123 ATP9AO75110 1047 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
BRCA1-223ENST00000494123 SP2Q02086 613 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 CALCRLQ16602 461 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
BRCA1-223ENST00000494123 Q9Y3F1 56 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 PCDHB6Q9Y5E3 794 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 FRMPD3Q5JV73 1810 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 DOCK5Q9H7D0 1870 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
BRCA1-223ENST00000494123 KCNA2P16389 499 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 DDIT3P35638 169 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 FAM173BQ6P4H8 233 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 CYFIP1Q7L576 1253 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 TBC1D22BQ9NU19 505 aa16.48■□□□□ 0.23
BRCA1-223ENST00000494123 SYNRGQ9UMZ2 1314 aa16.47■□□□□ 0.23
BRCA1-223ENST00000494123 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
BRCA1-223ENST00000494123 TBX3O15119 743 aa16.47■□□□□ 0.23
BRCA1-223ENST00000494123 GAS7O60861 476 aa16.47■□□□□ 0.23
BRCA1-223ENST00000494123 GJB1P08034 283 aa16.47■□□□□ 0.23
BRCA1-223ENST00000494123 C6orf222P0C671 652 aaPredicted RBP16.47■□□□□ 0.23
BRCA1-223ENST00000494123 PTGS1P23219 599 aa16.47■□□□□ 0.23
BRCA1-223ENST00000494123 ITGB3BPQ13352 177 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms