RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 CIZ1Q9ULV3 898 aaPredicted RBP17.87■□□□□ 0.45
HPS4-216ENST00000493455 TCHHQ07283 1943 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 IGLV3-22A0A075B6J6 115 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 FIBPO43427 364 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 NEMFO60524 1076 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 ZNF865P0CJ78 1059 aaPredicted RBP17.86■□□□□ 0.45
HPS4-216ENST00000493455 TXNP10599 105 aaKnown RBP17.86■□□□□ 0.45
HPS4-216ENST00000493455 GCFC2P16383 781 aaKnown RBP17.86■□□□□ 0.45
HPS4-216ENST00000493455 CIITAP33076 1130 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 TRAPPC10P48553 1259 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 SETQ01105 290 aaPredicted RBP17.86■□□□□ 0.45
HPS4-216ENST00000493455 SP4Q02446 784 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 TTLL4Q14679 1199 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 PKN2Q16513 984 aaKnown RBP17.86■□□□□ 0.45
HPS4-216ENST00000493455 LY6KQ17RY6 165 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 TMEM63BQ5T3F8 832 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 GJC2Q5T442 439 aaPredicted RBP17.86■□□□□ 0.45
HPS4-216ENST00000493455 TAPT1Q6NXT6 567 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 SCFD2Q8WU76 684 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 COPS5Q92905 334 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 GPRASP2Q96D09 838 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 INPP4AQ96PE3 977 aaPredicted RBP17.86■□□□□ 0.45
HPS4-216ENST00000493455 MCOLN1Q9GZU1 580 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 KATNBL1Q9H079 304 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 KCNH7Q9NS40 1196 aa17.86■□□□□ 0.45
HPS4-216ENST00000493455 TFIP11Q9UBB9 837 aaKnown RBP17.86■□□□□ 0.45
HPS4-216ENST00000493455 MEIS1O00470 390 aa17.85■□□□□ 0.45
HPS4-216ENST00000493455 ARIH2O95376 493 aa17.85■□□□□ 0.45
HPS4-216ENST00000493455 MYCNP04198 464 aaPredicted RBP17.85■□□□□ 0.45
HPS4-216ENST00000493455 TNFAIP2Q03169 654 aa17.85■□□□□ 0.45
HPS4-216ENST00000493455 SEMA3FQ13275 785 aa17.85■□□□□ 0.45
HPS4-216ENST00000493455 CALCRLQ16602 461 aa17.85■□□□□ 0.45
HPS4-216ENST00000493455 MOXD1Q6UVY6 613 aa17.85■□□□□ 0.45
HPS4-216ENST00000493455 ZNF396Q96N95 335 aaPredicted RBP17.85■□□□□ 0.45
HPS4-216ENST00000493455 ZNF577Q9BSK1 485 aa17.85■□□□□ 0.45
HPS4-216ENST00000493455 FAM184BQ9ULE4 1060 aa17.85■□□□□ 0.45
HPS4-216ENST00000493455 CLIC4Q9Y696 253 aa17.85■□□□□ 0.45
HPS4-216ENST00000493455 MSH4O15457 936 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 AKR1A1P14550 325 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 SMPD1P17405 629 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 UBA1P22314 1058 aaKnown RBP17.84■□□□□ 0.45
HPS4-216ENST00000493455 DNM1Q05193 864 aaKnown RBP17.84■□□□□ 0.45
HPS4-216ENST00000493455 MTFR1Q15390 333 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 SF3A1Q15459 793 aaKnown RBP17.84■□□□□ 0.45
HPS4-216ENST00000493455 Q4G0T1 1027 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 PPP4R3AQ6IN85 833 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 LENG9Q96B70 501 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 CDHR1Q96JP9 859 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 USP28Q96RU2 1077 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 UNC93B1Q9H1C4 597 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 TMEM60Q9H2L4 133 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 AGO4Q9HCK5 861 aaKnown RBP17.84■□□□□ 0.45
HPS4-216ENST00000493455 HMX1Q9NP08 348 aaPredicted RBP17.84■□□□□ 0.45
HPS4-216ENST00000493455 FRMPD3Q5JV73 1810 aa17.84■□□□□ 0.45
HPS4-216ENST00000493455 CYP3A7-CYP3A51PA0A087WV96 503 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 SPATA31C2B4DYI2 1134 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 ADCY6O43306 1168 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 ATP9AO75110 1047 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 BAG4O95429 457 aaKnown RBP17.83■□□□□ 0.44
HPS4-216ENST00000493455 GGPS1O95749 300 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 IGHA2P01877 340 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 CYP3A7P24462 503 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 CYFIP1Q7L576 1253 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 NIPA1Q7RTP0 329 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 SDF4Q9BRK5 362 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 BCAS3Q9H6U6 928 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.83■□□□□ 0.44
HPS4-216ENST00000493455 NRBP1Q9UHY1 535 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 ATP6V1DQ9Y5K8 247 aa17.83■□□□□ 0.44
HPS4-216ENST00000493455 IPO5O00410 1097 aaKnown RBP17.82■□□□□ 0.44
HPS4-216ENST00000493455 CHMP2AO43633 222 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 OR52Z1P0C646 297 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 ICAM3P32942 547 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 TXKP42681 527 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 SP2Q02086 613 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 PTGDRQ13258 359 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 STK38Q15208 465 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 TPRNQ4KMQ1 711 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 MAP3K21Q5TCX8 1036 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 LRCH2Q5VUJ6 765 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 IQSEC1Q6DN90 963 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 KCNV1Q6PIU1 500 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 DHX37Q8IY37 1157 aaKnown RBP17.82■□□□□ 0.44
HPS4-216ENST00000493455 OR6J1Q8NGC5 347 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 MBOAT7Q96N66 472 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.82■□□□□ 0.44
HPS4-216ENST00000493455 RNF208Q9H0X6 261 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 MLXIPQ9HAP2 919 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 TCEAL9Q9UHQ7 104 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 DDX41Q9UJV9 622 aaKnown RBP17.82■□□□□ 0.44
HPS4-216ENST00000493455 CEP131Q9UPN4 1083 aa17.82■□□□□ 0.44
HPS4-216ENST00000493455 RBM47A0AV96 593 aaKnown RBP17.81■□□□□ 0.44
HPS4-216ENST00000493455 SEPT4O43236 478 aa17.81■□□□□ 0.44
HPS4-216ENST00000493455 DYNC1LI2O43237 492 aaPredicted RBP17.81■□□□□ 0.44
HPS4-216ENST00000493455 GAS7O60861 476 aa17.81■□□□□ 0.44
HPS4-216ENST00000493455 GH1P01241 217 aa17.81■□□□□ 0.44
HPS4-216ENST00000493455 CCL5P13501 91 aa17.81■□□□□ 0.44
HPS4-216ENST00000493455 KCNA2P16389 499 aa17.81■□□□□ 0.44
HPS4-216ENST00000493455 ITGB3BPQ13352 177 aaPredicted RBP17.81■□□□□ 0.44
HPS4-216ENST00000493455 DUSP28Q4G0W2 176 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms