RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 CUEDC2Q9H467 287 aa8.3□□□□□ -1.08
VPS45-209ENST00000491789 KANSL2Q9H9L4 492 aa8.3□□□□□ -1.08
VPS45-209ENST00000491789 RRAGDQ9NQL2 400 aaPredicted RBP8.3□□□□□ -1.08
VPS45-209ENST00000491789 RMND1Q9NWS8 449 aa8.3□□□□□ -1.08
VPS45-209ENST00000491789 NYAP2Q9P242 653 aa8.3□□□□□ -1.08
VPS45-209ENST00000491789 IMPACTQ9P2X3 320 aa8.3□□□□□ -1.08
VPS45-209ENST00000491789 HERC5Q9UII4 1024 aaKnown RBP8.3□□□□□ -1.08
VPS45-209ENST00000491789 MYH1P12882 1939 aa8.3□□□□□ -1.08
VPS45-209ENST00000491789 SIPA1L1O43166 1804 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 GREB1LQ9C091 1923 aaPredicted RBP8.29□□□□□ -1.08
VPS45-209ENST00000491789 DDTLA6NHG4 134 aaPredicted RBP8.29□□□□□ -1.08
VPS45-209ENST00000491789 TNFRSF10AO00220 468 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 SLC26A4O43511 780 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 PDHBP11177 359 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 AKR1B1P15121 316 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 SHMT1P34896 483 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 LACTBP83111 547 aaPredicted RBP8.29□□□□□ -1.08
VPS45-209ENST00000491789 ZNF543Q08ER8 600 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 SNAPC2Q13487 334 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 DCAF15Q66K64 600 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 GPAT2Q6NUI2 795 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 TATDN1Q6P1N9 297 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 RNF19BQ6ZMZ0 732 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 PIK3AP1Q6ZUJ8 805 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 DHX40Q8IX18 779 aaKnown RBP8.29□□□□□ -1.08
VPS45-209ENST00000491789 REXO1Q8N1G1 1221 aaKnown RBP8.29□□□□□ -1.08
VPS45-209ENST00000491789 AOPEPQ8N6M6 819 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 MKL1Q969V6 931 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 SHISA4Q96DD7 197 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 ZNF333Q96JL9 665 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 CLIC6Q96NY7 704 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 GSDMAQ96QA5 445 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 CSRNP2Q9H175 543 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 ZCCHC17Q9NP64 241 aaKnown RBP8.29□□□□□ -1.08
VPS45-209ENST00000491789 DDX4Q9NQI0 724 aaKnown RBP8.29□□□□□ -1.08
VPS45-209ENST00000491789 CPA4Q9UI42 421 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 KCNH4Q9UQ05 1017 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 MYH6P13533 1939 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 ADGRA2Q96PE1 1338 aa8.29□□□□□ -1.08
VPS45-209ENST00000491789 POLR2DO15514 142 aaKnown RBP8.28□□□□□ -1.08
VPS45-209ENST00000491789 CYTH3O43739 400 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 GCFC2P16383 781 aaKnown RBP8.28□□□□□ -1.08
VPS45-209ENST00000491789 ERCC5P28715 1186 aaPredicted RBP8.28□□□□□ -1.08
VPS45-209ENST00000491789 RPIAP49247 311 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 ADCY7P51828 1080 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 TERF1P54274 439 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 FOXC1Q12948 553 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 SLC4A8Q2Y0W8 1093 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 DPCR1Q3MIW9 517 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 LONRF3Q496Y0 759 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 MSS51Q4VC12 460 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 PLA2G2CQ5R387 149 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 NOL9Q5SY16 702 aaKnown RBP8.28□□□□□ -1.08
VPS45-209ENST00000491789 DTHD1Q6ZMT9 781 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 ANKRD23Q86SG2 305 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 NEK8Q86SG6 692 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 DRC7Q8IY82 874 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 STAG2Q8N3U4 1231 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 FAM160A2Q8N612 972 aaPredicted RBP8.28□□□□□ -1.08
VPS45-209ENST00000491789 GMCL1P1Q8NEA9 526 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 SPATA20Q8TB22 786 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 SH3TC2Q8TF17 1288 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 PIBF1Q8WXW3 757 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 CCDC47Q96A33 483 aaKnown RBP8.28□□□□□ -1.08
VPS45-209ENST00000491789 HOOK2Q96ED9 719 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 RAB34Q9BZG1 259 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 PRDM9Q9NQV7 894 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.28□□□□□ -1.08
VPS45-209ENST00000491789 CLIP2Q9UDT6 1046 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 PCDHA6Q9UN73 950 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 PCDHA8Q9Y5H6 950 aa8.28□□□□□ -1.08
VPS45-209ENST00000491789 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS45-209ENST00000491789 PNMA6FA0A0J9YX94 578 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 hCG_1642624A0A1W2PR95 340 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 USP17L5A8MUK1 530 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 PDHXO00330 501 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 HOXA2O43364 376 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 MYCP01106 439 aaPredicted RBP8.27□□□□□ -1.09
VPS45-209ENST00000491789 OR52Z1P0C646 297 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 ATP2B1P20020 1258 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 MCM7P33993 719 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 PPP1R2P41236 205 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 SARSP49591 514 aaKnown RBP8.27□□□□□ -1.09
VPS45-209ENST00000491789 MRPL12P52815 198 aaKnown RBP8.27□□□□□ -1.09
VPS45-209ENST00000491789 PRR20EP86478 221 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 PRR20CP86479 221 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 PRR20DP86480 221 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 PRR20BP86481 221 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 PRR20AP86496 221 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 MORC3Q14149 939 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 ZNF174Q15697 407 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 TMEM266Q2M3C6 531 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 CERKLQ49MI3 558 aaPredicted RBP8.27□□□□□ -1.09
VPS45-209ENST00000491789 SH3RF1Q7Z6J0 888 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
VPS45-209ENST00000491789 CCDC150Q8NCX0 1101 aa8.27□□□□□ -1.09
VPS45-209ENST00000491789 ENOX1Q8TC92 643 aaKnown RBP8.27□□□□□ -1.09
VPS45-209ENST00000491789 SYMPKQ92797 1274 aaKnown RBP8.27□□□□□ -1.09
VPS45-209ENST00000491789 GPKOWQ92917 476 aaPredicted RBP eCLIP8.27□□□□□ -1.09
VPS45-209ENST00000491789 EMID1Q96A84 441 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms