RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 HPS3Q969F9 1004 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 FAM207AQ9NSI2 230 aaPredicted RBP16.47■□□□□ 0.23
TTC3-219ENST00000485402 DLEC1Q9Y238 1755 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 AGPSO00116 658 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 PSMA7O14818 248 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 PDXDC2PQ6P474 469 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 SH2D3CQ8N5H7 860 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 IFT81Q8WYA0 676 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 RPS6KA5O75582 802 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 MOCS3O95396 460 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 BMP15O95972 392 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 ATP2C1P98194 919 aaPredicted RBP16.46■□□□□ 0.23
TTC3-219ENST00000485402 GABPAQ06546 454 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 EFCAB13Q8IY85 973 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 SRBD1Q8N5C6 995 aaKnown RBP16.46■□□□□ 0.23
TTC3-219ENST00000485402 GMLQ99445 158 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 FHDC1Q9C0D6 1143 aaPredicted RBP16.46■□□□□ 0.23
TTC3-219ENST00000485402 LAMB1P07942 1786 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 LGALS16A8MUM7 142 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 NCK2O43639 380 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 PDCLQ13371 301 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
TTC3-219ENST00000485402 SH3BP5LQ7L8J4 393 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 LRRC47Q8N1G4 583 aaKnown RBP16.46■□□□□ 0.23
TTC3-219ENST00000485402 CPVLQ9H3G5 476 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 MMRN2Q9H8L6 949 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 RBM28Q9NW13 759 aaKnown RBP16.46■□□□□ 0.23
TTC3-219ENST00000485402 PI4KBQ9UBF8 816 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 PRPF3O43395 683 aaKnown RBP16.46■□□□□ 0.23
TTC3-219ENST00000485402 AKR1B10O60218 316 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 CT47A1Q5JQC4 288 aaPredicted RBP16.46■□□□□ 0.23
TTC3-219ENST00000485402 NOC4LQ9BVI4 516 aaKnown RBP16.46■□□□□ 0.23
TTC3-219ENST00000485402 IDI2Q9BXS1 227 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 VPS33BQ9H267 617 aa16.46■□□□□ 0.23
TTC3-219ENST00000485402 KIF5BP33176 963 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 SHROOM1Q2M3G4 852 aaPredicted RBP16.45■□□□□ 0.22
TTC3-219ENST00000485402 NFRKBQ6P4R8 1299 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 CSRNP1Q96S65 589 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 DHX36Q9H2U1 1008 aaKnown RBP16.45■□□□□ 0.22
TTC3-219ENST00000485402 VIPAS39Q9H9C1 493 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 A0A087WUV0 522 aaPredicted RBP16.45■□□□□ 0.22
TTC3-219ENST00000485402 NDUFAB1O14561 156 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 SHMT1P34896 483 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 RCAN1P53805 252 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 PPP2R5BQ15173 497 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 NBPF9Q3BBW0 867 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 ESYT3A0FGR9 886 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 NKRFO15226 690 aaKnown RBP eCLIP16.45■□□□□ 0.226e-8■■■□□ 18.1
TTC3-219ENST00000485402 BUB1O43683 1085 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 TMTC3Q6ZXV5 915 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 EHBP1Q8NDI1 1231 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 ARL8AQ96BM9 186 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 CAPN11Q9UMQ6 739 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
TTC3-219ENST00000485402 AARSP49588 968 aaKnown RBP eCLIP16.44■□□□□ 0.225e-6■■■□□ 16
TTC3-219ENST00000485402 USP17L2Q6R6M4 530 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 DTHD1Q6ZMT9 781 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 EXOC1Q9NV70 894 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 ZNF70Q9UC06 446 aaPredicted RBP16.44■□□□□ 0.22
TTC3-219ENST00000485402 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 CAPN6Q9Y6Q1 641 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 TNIP1Q15025 636 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 PAPD7Q5XG87 772 aaKnown RBP16.44■□□□□ 0.22
TTC3-219ENST00000485402 AGBL3Q8NEM8 1001 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 IFIH1Q9BYX4 1025 aaKnown RBP16.44■□□□□ 0.22
TTC3-219ENST00000485402 DNAJC18Q9H819 358 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 VAT1LQ9HCJ6 419 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 TCP11L1Q9NUJ3 509 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 CCDC194A0A1B0GVG4 234 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 GDF11O95390 407 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 DNM2P50570 870 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 PRELPP51888 382 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 PDE4DQ08499 809 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 ADSSL1Q8N142 457 aa16.44■□□□□ 0.22
TTC3-219ENST00000485402 USO1O60763 962 aaKnown RBP16.43■□□□□ 0.22
TTC3-219ENST00000485402 INPP5BP32019 993 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 GUCY2FP51841 1108 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 ASIC1P78348 528 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
TTC3-219ENST00000485402 IQCEQ6IPM2 695 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 FAM184BQ9ULE4 1060 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 TACC1O75410 805 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 KRT14P02533 472 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 SCG2P13521 617 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 INF2Q27J81 1249 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 RNF187Q5TA31 235 aaPredicted RBP16.43■□□□□ 0.22
TTC3-219ENST00000485402 MTMR4Q9NYA4 1195 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 FECHP22830 423 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 MS4A14Q96JA4 679 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 CNOT6LQ96LI5 555 aaKnown RBP16.43■□□□□ 0.22
TTC3-219ENST00000485402 TANGO6Q9C0B7 1094 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 CAPN7Q9Y6W3 813 aa16.43■□□□□ 0.22
TTC3-219ENST00000485402 EGFRP00533 1210 aa16.42■□□□□ 0.22
TTC3-219ENST00000485402 FUT2Q10981 343 aa16.42■□□□□ 0.22
TTC3-219ENST00000485402 PTPROQ16827 1216 aa16.42■□□□□ 0.22
TTC3-219ENST00000485402 SAMD7Q7Z3H4 446 aa16.42■□□□□ 0.22
TTC3-219ENST00000485402 MSL3Q8N5Y2 521 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms