RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PCBP1Q15365 356 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS13A-211ENST00000484581 SEPT7Q16181 437 aaKnown RBP6.04□□□□□ -1.44
VPS13A-211ENST00000484581 NTRK3Q16288 839 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 NOL9Q5SY16 702 aaKnown RBP6.04□□□□□ -1.44
VPS13A-211ENST00000484581 C1orf159Q96HA4 380 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 SCLYQ96I15 445 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 HHIPL1Q96JK4 782 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 KCNC2Q96PR1 638 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 ORAI3Q9BRQ5 295 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 MTFR1LQ9H019 292 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 SLC5A4Q9NY91 659 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 TNFRSF10DQ9UBN6 386 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 MBD1Q9UIS9 605 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-211ENST00000484581 FBXL21Q9UKT6 434 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 TMEM82A0PJX8 343 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 N4BP3O15049 544 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 KIF3BO15066 747 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 FOXD2O60548 495 aaPredicted RBP6.03□□□□□ -1.44
VPS13A-211ENST00000484581 PRAMEF1O95521 474 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 SNRPB2P08579 225 aaKnown RBP6.03□□□□□ -1.44
VPS13A-211ENST00000484581 JMJD7P0C870 316 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 NAT1P18440 290 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 VIPR1P32241 457 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 ARL4AP40617 200 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 MTMR1Q13613 665 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 SLC35F1Q5T1Q4 408 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 GALNT18Q6P9A2 607 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 UBE2R2Q712K3 238 aaPredicted RBP6.03□□□□□ -1.44
VPS13A-211ENST00000484581 FIBCD1Q8N539 461 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 TMEM145Q8NBT3 493 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 PANK1Q8TE04 598 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 TSR2Q969E8 191 aaKnown RBP6.03□□□□□ -1.44
VPS13A-211ENST00000484581 MAGEB10Q96LZ2 347 aaPredicted RBP6.03□□□□□ -1.44
VPS13A-211ENST00000484581 TTC1Q99614 292 aa6.03□□□□□ -1.44
VPS13A-211ENST00000484581 NOL6Q9H6R4 1146 aaKnown RBP6.03□□□□□ -1.44
VPS13A-211ENST00000484581 APOBEC2Q9Y235 224 aaKnown RBP6.03□□□□□ -1.44
VPS13A-211ENST00000484581 TCRBV16S1A1N1A0A5B0 115 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 BLACEA4D250 179 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 WTIPA6NIX2 430 aaPredicted RBP6.02□□□□□ -1.45
VPS13A-211ENST00000484581 AQP7O14520 342 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 SIGLEC6O43699 453 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 APPP05067 770 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 MPOP05164 745 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 BPIP17213 487 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 ENDOUP21128 410 aaKnown RBP6.02□□□□□ -1.45
VPS13A-211ENST00000484581 SDHBP21912 280 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 KCNJ6P48051 423 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 AFF3P51826 1226 aaKnown RBP6.02□□□□□ -1.45
VPS13A-211ENST00000484581 AMPD2Q01433 879 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 SNW1Q13573 536 aaKnown RBP6.02□□□□□ -1.45
VPS13A-211ENST00000484581 NFIXQ14938 502 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 SF1Q15637 639 aaKnown RBP6.02□□□□□ -1.45
VPS13A-211ENST00000484581 CFAP100Q494V2 611 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 STYK1Q6J9G0 422 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 ZPBP2Q6X784 338 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 LHFPL2Q6ZUX7 228 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 WDR75Q8IWA0 830 aaKnown RBP6.02□□□□□ -1.45
VPS13A-211ENST00000484581 OR2W6PQ8NHA6 318 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 BRF1Q92994 677 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 USP7Q93009 1102 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 MTMR8Q96EF0 704 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 PRDM14Q9GZV8 571 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 PUS7LQ9H0K6 701 aaKnown RBP6.02□□□□□ -1.45
VPS13A-211ENST00000484581 MYH16Q9H6N6 1097 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 IFT22Q9H7X7 185 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 CNTD2Q9H8S5 307 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 CYP26B1Q9NR63 512 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 CHST7Q9NS84 486 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 SF3B6Q9Y3B4 125 aaKnown RBP6.02□□□□□ -1.45
VPS13A-211ENST00000484581 TAF6LQ9Y6J9 622 aa6.02□□□□□ -1.45
VPS13A-211ENST00000484581 E2F8A0AVK6 867 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 SHTN1A0MZ66 631 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 ZEB2O60315 1214 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 TRIM13O60858 407 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 PEX14O75381 377 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 EFEMP2O95967 443 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 SCGB1D2O95969 90 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 SYN1P17600 705 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 EPHB3P54753 998 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 YBX1P67809 324 aaKnown RBP6.01□□□□□ -1.45
VPS13A-211ENST00000484581 TMEM62Q0P6H9 643 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 LAPTM5Q13571 262 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 PPP2R5DQ14738 602 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 CDCA2Q69YH5 1023 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-211ENST00000484581 ZCCHC8Q6NZY4 707 aaKnown RBP6.01□□□□□ -1.45
VPS13A-211ENST00000484581 KIF18BQ86Y91 864 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 DCAF4Q8WV16 495 aa6.01□□□□□ -1.45
VPS13A-211ENST00000484581 FCRL2Q96LA5 508 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-211ENST00000484581 A0A0G2JLL6 359 aaPredicted RBP6□□□□□ -1.45
VPS13A-211ENST00000484581 MEIS1O00470 390 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 GNALP38405 381 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 ERVFRD-1P60508 538 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 TMPRSS15P98073 1019 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 CYP4F3Q08477 520 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 ITKQ08881 620 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 PIN1Q13526 163 aaPredicted RBP6□□□□□ -1.45
VPS13A-211ENST00000484581 PRSS53Q2L4Q9 553 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 GORABQ5T7V8 394 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 PIK3R6Q5UE93 754 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 USP53Q70EK8 1073 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms