RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 ATP6V0A2Q9Y487 856 aa15.78■□□□□ 0.12
NR1H3-220ENST00000481020 SAMM50Q9Y512 469 aa15.78■□□□□ 0.12
NR1H3-220ENST00000481020 BZW2Q9Y6E2 419 aaKnown RBP15.78■□□□□ 0.12
NR1H3-220ENST00000481020 CCDC188H7C350 402 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 NTSR2O95665 410 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 DYNLL1P63167 89 aaKnown RBP15.77■□□□□ 0.12
NR1H3-220ENST00000481020 NEDD9Q14511 834 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 CCDC40Q4G0X9 1142 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 LRRC55Q6ZSA7 311 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 CERS3Q8IU89 383 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 USP38Q8NB14 1042 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 ACTRT1Q8TDG2 376 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 TAF4BQ92750 862 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 ZNF287Q9HBT7 754 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 AIPL1Q9NZN9 384 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 MAD2L2Q9UI95 211 aa15.77■□□□□ 0.12
NR1H3-220ENST00000481020 CYP2D7A0A087X1C5 515 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 PALM3A6NDB9 673 aaPredicted RBP15.77■□□□□ 0.11
NR1H3-220ENST00000481020 C5orf60A6NFR6 353 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 FCER1AP12319 257 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 FKBP3Q00688 224 aaKnown RBP15.77■□□□□ 0.11
NR1H3-220ENST00000481020 RASSF7Q02833 373 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 EHHADHQ08426 723 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 TMEM266Q2M3C6 531 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 CCDC121Q6ZUS5 278 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 FBXO33Q7Z6M2 555 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 SLC4A9Q96Q91 983 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 CNOT10Q9H9A5 744 aaKnown RBP15.77■□□□□ 0.11
NR1H3-220ENST00000481020 KLC4Q9NSK0 619 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 SWAP70Q9UH65 585 aa15.77■□□□□ 0.11
NR1H3-220ENST00000481020 PHLPP1O60346 1717 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 GMNCA6NCL1 334 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 SNAP23O00161 211 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 CXCR5P32302 372 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 SLC1A4P43007 532 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 SF3B3Q15393 1217 aaKnown RBP15.76■□□□□ 0.11
NR1H3-220ENST00000481020 PREPLQ4J6C6 727 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-220ENST00000481020 LACTB2Q53H82 288 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-220ENST00000481020 WLSQ5T9L3 541 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 SPTY2D1Q68D10 685 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-220ENST00000481020 LRRC15Q8TF66 581 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 CASKIN2Q8WXE0 1202 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 LARP4BQ92615 738 aaKnown RBP15.76■□□□□ 0.11
NR1H3-220ENST00000481020 GPKOWQ92917 476 aaPredicted RBP eCLIP15.76■□□□□ 0.11
NR1H3-220ENST00000481020 ZBTB9Q96C00 473 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 COL4A3BPQ9Y5P4 624 aa15.76■□□□□ 0.11
NR1H3-220ENST00000481020 EPHB6O15197 1021 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 TRAPPC3O43617 180 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 PALMO75781 387 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 GHRP10912 638 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 ATP1A2P50993 1020 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 EIF3BP55884 814 aaKnown RBP15.75■□□□□ 0.11
NR1H3-220ENST00000481020 GFPT1Q06210 699 aaPredicted RBP15.75■□□□□ 0.11
NR1H3-220ENST00000481020 CLUL1Q15846 466 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 PPP2R5EQ16537 467 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 SKIDA1Q1XH10 827 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 NBPF9Q3BBW0 867 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 TDRD12Q587J7 1177 aaKnown RBP15.75■□□□□ 0.11
NR1H3-220ENST00000481020 HEATR3Q7Z4Q2 680 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 SH2D3CQ8N5H7 860 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 MMTAG2Q9BU76 263 aaKnown RBP15.75■□□□□ 0.11
NR1H3-220ENST00000481020 SLITRK6Q9H5Y7 841 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 DONSONQ9NYP3 566 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 SALL4Q9UJQ4 1053 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 PLAAQ9Y263 795 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 MYH1P12882 1939 aa15.75■□□□□ 0.11
NR1H3-220ENST00000481020 ADAMTS3O15072 1205 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 NMT2O60551 498 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 CCNT1O60563 726 aaKnown RBP15.74■□□□□ 0.11
NR1H3-220ENST00000481020 FAM153BP0C7A2 387 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 VEGFAP15692 232 aaPredicted RBP15.74■□□□□ 0.11
NR1H3-220ENST00000481020 GUCY1A3Q02108 690 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 FAM153CQ494X1 144 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 ZCWPW2Q504Y3 356 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 FAM47AQ5JRC9 791 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 FAM83BQ5T0W9 1011 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 C12orf60Q5U649 245 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 KCTD16Q68DU8 428 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 TEX2Q8IWB9 1127 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 ZNF384Q8TF68 577 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 SCFD2Q8WU76 684 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 LMBR1Q8WVP7 490 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 IFT81Q8WYA0 676 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 CENPTQ96BT3 561 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 CYFIP2Q96F07 1278 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 CDK5RAP3Q96JB5 506 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 CCDC87Q9NVE4 849 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 FAM153AQ9UHL3 310 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 SLC12A6Q9UHW9 1150 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 ZNF652Q9Y2D9 606 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 COL16A1Q07092 1604 aaPredicted RBP15.74■□□□□ 0.11
NR1H3-220ENST00000481020 NCK2O43639 380 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 CAMTA2O94983 1202 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 GYG1P46976 350 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 USP11P51784 963 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 TFAP4Q01664 338 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 MECOMQ03112 1051 aa15.74■□□□□ 0.11
NR1H3-220ENST00000481020 RPS6KA1Q15418 735 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms