RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 HAX1O00165 279 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 AQP7O14520 342 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 CLGNO14967 610 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 RASA4O43374 803 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ADH1CP00326 375 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 CYP2E1P05181 493 aaPredicted RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PYGLP06737 847 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ITGAVP06756 1048 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 C6orf222P0C671 652 aaPredicted RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SMARCA1P28370 1054 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 GPC1P35052 558 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 CTNNA1P35221 906 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 HOXD12P35452 270 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ADD2P35612 726 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 GRIK1P39086 918 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ADCYAP1R1P41586 468 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PTGIRP43119 386 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PLA2G4AP47712 749 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 MMP14P50281 582 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 CACNB3P54284 484 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 HNRNPUQ00839 825 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PLIN5Q00G26 463 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ICA1Q05084 483 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PDE4BQ07343 736 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 HYAL2Q12891 473 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 DCTN1Q14203 1278 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SMC1AQ14683 1233 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ZYXQ15942 572 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 TAF12Q16514 161 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 CCNG2Q16589 344 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 KIAA0753Q2KHM9 967 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PLA2G4EQ3MJ16 856 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SLC27A3Q5K4L6 730 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 RC3H1Q5TC82 1133 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 AGAP9Q5VTM2 703 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ITPRIPL1Q6GPH6 555 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PGBD2Q6P3X8 592 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 POMZP3Q6PJE2 187 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PDZD4Q76G19 769 aaPredicted RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 FGD2Q7Z6J4 655 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 GALNT5Q7Z7M9 940 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 RPAINQ86UA6 219 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 MYCT1Q8N699 235 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 C7orf31Q8N865 590 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 TMEM102Q8N9M5 508 aaPredicted RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 LSM14AQ8ND56 463 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SMC1BQ8NDV3 1235 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 NSUN6Q8TEA1 469 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 IPO4Q8TEX9 1081 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SMARCC1Q92922 1105 aaPredicted RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 OSBP2Q969R2 916 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PPP1R14AQ96A00 147 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 CCDC47Q96A33 483 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ARL8AQ96BM9 186 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 TBC1D20Q96BZ9 403 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 DDX11Q96FC9 970 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 VMP1Q96GC9 406 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 HSH2DQ96JZ2 352 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 CCDC140Q96MF4 163 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PNMA5Q96PV4 448 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 MRPL9Q9BYD2 267 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SEZ6LQ9BYH1 1024 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 VPS11Q9H270 941 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 FZD8Q9H461 694 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PLEKHA5Q9HAU0 1116 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ALG13Q9NP73 1137 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 CABP5Q9NP86 173 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 MTMR10Q9NXD2 777 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SAMD15Q9P1V8 674 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 CCDC39Q9UFE4 941 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SLC13A4Q9UKG4 626 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 TRPC5Q9UL62 973 aaPredicted RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 NAP1L2Q9ULW6 460 aaPredicted RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 INVSQ9Y283 1065 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 GPR52Q9Y2T5 361 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 TMX2Q9Y320 296 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SNCAIPQ9Y6H5 919 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 MYOM1P52179 1685 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 PHLPP1O60346 1717 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 ARHGEF28Q8N1W1 1705 aaKnown RBP3.35□□□□□ -1.87
HMGN4-202ENST00000477243 BRCA2P51587 3418 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SHPRHQ149N8 1683 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 FAM227AF5H4B4 570 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 TOR1BO14657 336 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 XPOTO43592 962 aaKnown RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 EIF4EBP3O60516 100 aaPredicted RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 GFPT2O94808 682 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 ARIH2O95376 493 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 CPP00450 1065 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 CYP11A1P05108 521 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 PSAPP07602 524 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 IDEP14735 1019 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 RPL17P18621 184 aaKnown RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 SOX18P35713 384 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 KRT20P35900 424 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 UBA7P41226 1012 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 STT3AP46977 705 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 KPNA1P52294 538 aaPredicted RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 ZNF131P52739 623 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 NRLP54845 237 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms