RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 CCDC84Q86UT8 332 aaPredicted RBP19.8■□□□□ 0.76
MCF2L-221ENST00000469415 IKZF4Q9H2S9 585 aa19.8■□□□□ 0.76
MCF2L-221ENST00000469415 A0A1W2PQC6 194 aa19.8■□□□□ 0.76
MCF2L-221ENST00000469415 NCK2O43639 380 aa19.8■□□□□ 0.76
MCF2L-221ENST00000469415 ZBED6P86452 979 aa19.8■□□□□ 0.76
MCF2L-221ENST00000469415 CCDC102AQ96A19 550 aa19.8■□□□□ 0.76
MCF2L-221ENST00000469415 TCP10L2B9ZVM9 353 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 KRT86O43790 486 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 GH2P01242 217 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 GFPT1Q06210 699 aaPredicted RBP19.79■□□□□ 0.76
MCF2L-221ENST00000469415 GABPB1Q06547 395 aaPredicted RBP19.79■□□□□ 0.76
MCF2L-221ENST00000469415 KIF5AQ12840 1032 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 FAM26FQ5R3K3 315 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 CERS3Q8IU89 383 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 HAUS4Q9H6D7 363 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 ARHGAP20Q9P2F6 1191 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 SAR1BQ9Y6B6 198 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 LAMB1P07942 1786 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 H3BQF6 201 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 CENPPQ6IPU0 288 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 SH3BP5LQ7L8J4 393 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 MYOCDQ8IZQ8 938 aa19.79■□□□□ 0.76
MCF2L-221ENST00000469415 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.79■□□□□ 0.76
MCF2L-221ENST00000469415 IFIH1Q9BYX4 1025 aaKnown RBP19.79■□□□□ 0.76
MCF2L-221ENST00000469415 BMP2KQ9NSY1 1161 aaPredicted RBP19.79■□□□□ 0.76
MCF2L-221ENST00000469415 DDX60LQ5H9U9 1706 aaKnown RBP19.79■□□□□ 0.76
MCF2L-221ENST00000469415 F5H6K3 240 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 MYL1P05976 194 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 KLRC3Q07444 240 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 C2orf54Q08AI8 447 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 ANO3Q9BYT9 981 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 CAPN6Q9Y6Q1 641 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 MED24O75448 989 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 NPR1P16066 1061 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 KRT83P78385 493 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 TBC1D5Q92609 795 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 PKD2L1Q9P0L9 805 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 PLA2G4BP0C869 781 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 ZNF76P36508 570 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 FXR2P51116 673 aaKnown RBP eCLIP19.78■□□□□ 0.76
MCF2L-221ENST00000469415 RASSF7Q02833 373 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 TTYH3Q9C0H2 523 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 FAM198AQ9UFP1 575 aa19.78■□□□□ 0.76
MCF2L-221ENST00000469415 IGKV6D-41A0A0C4DH26 115 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 ESYT2A0FGR8 921 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 SNHG28P0DPA3 235 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 UTP14CQ5TAP6 766 aaKnown RBP19.77■□□□□ 0.76
MCF2L-221ENST00000469415 SPATA31A6Q5VVP1 1343 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 PDE2AO00408 941 aaPredicted RBP19.77■□□□□ 0.76
MCF2L-221ENST00000469415 ECE2O60344 883 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 ECE1P42892 770 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 POLR2FP61218 127 aaKnown RBP19.77■□□□□ 0.76
MCF2L-221ENST00000469415 GPATCH4Q5T3I0 446 aaKnown RBP19.77■□□□□ 0.76
MCF2L-221ENST00000469415 CCDC174Q6PII3 467 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 NLGN1Q8N2Q7 840 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 NOC3LQ8WTT2 800 aaKnown RBP19.77■□□□□ 0.76
MCF2L-221ENST00000469415 TSG101Q99816 390 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 FAM53CQ9NYF3 392 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 VPS18Q9P253 973 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 NAV1Q8NEY1 1877 aa19.77■□□□□ 0.76
MCF2L-221ENST00000469415 CASP5P51878 434 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 KIF11P52732 1056 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 TCERG1LQ5VWI1 586 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 RGL1Q9NZL6 768 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 STK17AQ9UEE5 414 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 DLEC1Q9Y238 1755 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 CFBP00751 764 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 EPS15P42566 896 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 PIGOQ8TEQ8 1089 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 SECISBP2LQ93073 1101 aaKnown RBP19.76■□□□□ 0.75
MCF2L-221ENST00000469415 SWAP70Q9UH65 585 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 RSPH10B2B2RC85 870 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 ZBTB39O15060 712 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 RSPH10BP0C881 870 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 FECHP22830 423 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 EZH2Q15910 746 aaKnown RBP19.76■□□□□ 0.75
MCF2L-221ENST00000469415 DNAJC19Q96DA6 116 aa19.76■□□□□ 0.75
MCF2L-221ENST00000469415 LSM14BQ9BX40 385 aaKnown RBP19.76■□□□□ 0.75
MCF2L-221ENST00000469415 MYH1P12882 1939 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 SBF2Q86WG5 1849 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 ALDH1B1P30837 517 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 AMPD2Q01433 879 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 PPARDQ03181 441 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 RAPGEF1Q13905 1077 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 MAN2A1Q16706 1144 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 ABCB5Q2M3G0 1257 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 MIGA2Q7L4E1 593 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 COG1Q8WTW3 980 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 PRMT6Q96LA8 375 aaPredicted RBP19.75■□□□□ 0.75
MCF2L-221ENST00000469415 MAGEF1Q9HAY2 307 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 BCS1LQ9Y276 419 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 CCDC151A5D8V7 595 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 PRPF6O94906 941 aaKnown RBP19.75■□□□□ 0.75
MCF2L-221ENST00000469415 NDUFB10O96000 172 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 ACTN1P12814 892 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 MAGEA1P43355 309 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 ARHGAP4P98171 946 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 SLC7A5Q01650 507 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 RRP1BQ14684 758 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms