RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 SH2B1Q9NRF2 756 aaPredicted RBP21.97■■□□□ 1.11
USP11-205ENST00000467378 COL20A1Q9P218 1284 aa21.97■■□□□ 1.11
USP11-205ENST00000467378 ZHX1Q9UKY1 873 aaPredicted RBP21.97■■□□□ 1.11
USP11-205ENST00000467378 YBX2Q9Y2T7 364 aaKnown RBP21.97■■□□□ 1.11
USP11-205ENST00000467378 ARIH1Q9Y4X5 557 aaPredicted RBP21.97■■□□□ 1.11
USP11-205ENST00000467378 CHD9Q3L8U1 2897 aa21.97■■□□□ 1.11
USP11-205ENST00000467378 SYNGAP1Q96PV0 1343 aa21.97■■□□□ 1.11
USP11-205ENST00000467378 DTNBO60941 627 aa21.96■■□□□ 1.11
USP11-205ENST00000467378 C6orf222P0C671 652 aaPredicted RBP21.96■■□□□ 1.11
USP11-205ENST00000467378 KCNQ1P51787 676 aa21.96■■□□□ 1.11
USP11-205ENST00000467378 CCSAPQ6IQ19 270 aaPredicted RBP21.96■■□□□ 1.11
USP11-205ENST00000467378 MSL3Q8N5Y2 521 aaKnown RBP21.96■■□□□ 1.11
USP11-205ENST00000467378 PCSK9Q8NBP7 692 aaKnown RBP21.96■■□□□ 1.11
USP11-205ENST00000467378 HERVK_113Q902F9 699 aa21.96■■□□□ 1.11
USP11-205ENST00000467378 EPHX3Q9H6B9 360 aa21.96■■□□□ 1.11
USP11-205ENST00000467378 A0A0U1RQG5 324 aaPredicted RBP21.95■■□□□ 1.1
USP11-205ENST00000467378 GCOM1H8Y6P7 765 aaPredicted RBP21.95■■□□□ 1.1
USP11-205ENST00000467378 ARVCFO00192 962 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 DEXIO95424 95 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 FGBP02675 491 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 ASGR1P07306 291 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 POLR2MP0CAP2 368 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 CYP2C18P33260 490 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 MCM2P49736 904 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 IRX5P78411 483 aaPredicted RBP21.95■■□□□ 1.1
USP11-205ENST00000467378 PPP1R18Q6NYC8 613 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 CCDC83Q8IWF9 413 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 NSUN7Q8NE18 718 aaKnown RBP21.95■■□□□ 1.1
USP11-205ENST00000467378 DNERQ8NFT8 737 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 TAAR1Q96RJ0 339 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 STK36Q9NRP7 1315 aa21.95■■□□□ 1.1
USP11-205ENST00000467378 LRRC37A2A6NM11 1700 aa21.94■■□□□ 1.1
USP11-205ENST00000467378 PIK3CDO00329 1044 aa21.94■■□□□ 1.1
USP11-205ENST00000467378 MEIS2O14770 477 aa21.94■■□□□ 1.1
USP11-205ENST00000467378 DUSP11O75319 330 aaKnown RBP21.94■■□□□ 1.1
USP11-205ENST00000467378 SNAI1O95863 264 aaPredicted RBP21.94■■□□□ 1.1
USP11-205ENST00000467378 FDPSP14324 419 aaKnown RBP21.94■■□□□ 1.1
USP11-205ENST00000467378 HOXA13P31271 388 aaPredicted RBP21.94■■□□□ 1.1
USP11-205ENST00000467378 ALDH5A1P51649 535 aaPredicted RBP21.94■■□□□ 1.1
USP11-205ENST00000467378 NAPAP54920 295 aa21.94■■□□□ 1.1
USP11-205ENST00000467378 PSTPIP2Q9H939 334 aa21.94■■□□□ 1.1
USP11-205ENST00000467378 SPC25Q9HBM1 224 aa21.94■■□□□ 1.1
USP11-205ENST00000467378 ADD3Q9UEY8 706 aaKnown RBP21.94■■□□□ 1.1
USP11-205ENST00000467378 ASB14A6NK59 587 aa21.93■■□□□ 1.1
USP11-205ENST00000467378 CST5P28325 142 aaPredicted RBP21.93■■□□□ 1.1
USP11-205ENST00000467378 PRRC2BQ5JSZ5 2229 aaKnown RBP21.93■■□□□ 1.1
USP11-205ENST00000467378 PPP2R2DQ66LE6 453 aa21.93■■□□□ 1.1
USP11-205ENST00000467378 OTOP2Q7RTS6 562 aa21.93■■□□□ 1.1
USP11-205ENST00000467378 FAM126BQ8IXS8 530 aa21.93■■□□□ 1.1
USP11-205ENST00000467378 MORC4Q8TE76 937 aa21.93■■□□□ 1.1
USP11-205ENST00000467378 TMX3Q96JJ7 454 aa21.93■■□□□ 1.1
USP11-205ENST00000467378 LOC102724159A0A0B4J2E5 919 aa21.92■■□□□ 1.1
USP11-205ENST00000467378 SMCO2A6NFE2 343 aa21.92■■□□□ 1.1
USP11-205ENST00000467378 RABGGTBP53611 331 aa21.92■■□□□ 1.1
USP11-205ENST00000467378 PWP2Q15269 919 aaKnown RBP21.92■■□□□ 1.1
USP11-205ENST00000467378 TMEM31Q5JXX7 168 aa21.92■■□□□ 1.1
USP11-205ENST00000467378 USP17L6PQ6QN14 398 aa21.92■■□□□ 1.1
USP11-205ENST00000467378 ARMCX2Q7L311 632 aa21.92■■□□□ 1.1
USP11-205ENST00000467378 AIFM3Q96NN9 605 aa21.92■■□□□ 1.1
USP11-205ENST00000467378 LLPHQ9BRT6 129 aaKnown RBP21.92■■□□□ 1.1
USP11-205ENST00000467378 RIC8AQ9NPQ8 531 aa21.92■■□□□ 1.1
USP11-205ENST00000467378 DDX49Q9Y6V7 483 aaKnown RBP21.92■■□□□ 1.1
USP11-205ENST00000467378 KIAA1217Q5T5P2 1943 aa21.92■■□□□ 1.1
USP11-205ENST00000467378 JAK2O60674 1132 aa21.91■■□□□ 1.1
USP11-205ENST00000467378 GNASQ5JWF2 1037 aa21.91■■□□□ 1.1
USP11-205ENST00000467378 SMARCC2Q8TAQ2 1214 aa21.91■■□□□ 1.1
USP11-205ENST00000467378 CUL5Q93034 780 aa21.91■■□□□ 1.1
USP11-205ENST00000467378 RMDN3Q96TC7 470 aa21.91■■□□□ 1.1
USP11-205ENST00000467378 ZMYND12Q9H0C1 365 aa21.91■■□□□ 1.1
USP11-205ENST00000467378 SH3GLB2Q9NR46 395 aa21.91■■□□□ 1.1
USP11-205ENST00000467378 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.91■■□□□ 1.1
USP11-205ENST00000467378 VPS54Q9P1Q0 977 aa21.91■■□□□ 1.1
USP11-205ENST00000467378 ORC3Q9UBD5 711 aaPredicted RBP21.91■■□□□ 1.1
USP11-205ENST00000467378 ESYT2A0FGR8 921 aa21.9■■□□□ 1.1
USP11-205ENST00000467378 EDNRBP24530 442 aa21.9■■□□□ 1.1
USP11-205ENST00000467378 MRPL12P52815 198 aaKnown RBP21.9■■□□□ 1.1
USP11-205ENST00000467378 UBE2SQ16763 222 aa21.9■■□□□ 1.1
USP11-205ENST00000467378 FCHSD1Q86WN1 690 aa21.9■■□□□ 1.1
USP11-205ENST00000467378 TEX2Q8IWB9 1127 aa21.9■■□□□ 1.1
USP11-205ENST00000467378 NSUN6Q8TEA1 469 aaKnown RBP21.9■■□□□ 1.1
USP11-205ENST00000467378 CCDC12Q8WUD4 166 aaPredicted RBP21.9■■□□□ 1.1
USP11-205ENST00000467378 KATNBL1Q9H079 304 aa21.9■■□□□ 1.1
USP11-205ENST00000467378 PXMP2Q9NR77 195 aa21.9■■□□□ 1.1
USP11-205ENST00000467378 ADAMTS3O15072 1205 aa21.89■■□□□ 1.09
USP11-205ENST00000467378 MYOGP15173 224 aa21.89■■□□□ 1.09
USP11-205ENST00000467378 CLK2P49760 499 aaKnown RBP21.89■■□□□ 1.09
USP11-205ENST00000467378 ADCY7P51828 1080 aa21.89■■□□□ 1.09
USP11-205ENST00000467378 ACVR2BQ13705 512 aa21.89■■□□□ 1.09
USP11-205ENST00000467378 IWS1Q96ST2 819 aa21.89■■□□□ 1.09
USP11-205ENST00000467378 GLT8D2Q9H1C3 349 aa21.89■■□□□ 1.09
USP11-205ENST00000467378 ABHD16BQ9H3Z7 469 aa21.89■■□□□ 1.09
USP11-205ENST00000467378 HIPK3Q9H422 1215 aa21.89■■□□□ 1.09
USP11-205ENST00000467378 SLC4A7Q9Y6M7 1214 aa21.89■■□□□ 1.09
USP11-205ENST00000467378 REV3LO60673 3130 aa21.88■■□□□ 1.09
USP11-205ENST00000467378 ADCY6O43306 1168 aa21.88■■□□□ 1.09
USP11-205ENST00000467378 GTPBP6O43824 516 aaPredicted RBP21.88■■□□□ 1.09
USP11-205ENST00000467378 CD4P01730 458 aa21.88■■□□□ 1.09
USP11-205ENST00000467378 GJA9P57773 515 aa21.88■■□□□ 1.09
USP11-205ENST00000467378 ARHGEF16Q5VV41 709 aa21.88■■□□□ 1.09
USP11-205ENST00000467378 FAM177A1Q8N128 213 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms