RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 LARP4BQ92615 738 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 INPP4AQ96PE3 977 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 MTMR9Q96QG7 549 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 SPZ1Q9BXG8 430 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 EDEM3Q9BZQ6 932 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 ATXN2Q99700 1313 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 MAST2Q6P0Q8 1798 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 FGFR1OPO95684 399 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 KLRC1P26715 233 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 EHHADHQ08426 723 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 B4GALNT4Q76KP1 1039 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 CD302Q8IX05 232 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 SH3RF3Q8TEJ3 882 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 CEP89Q96ST8 783 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 KRT12Q99456 494 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 NUDT12Q9BQG2 462 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 DNAJC5Q9H3Z4 198 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 C6orf50Q9HD87 102 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 TMEM260Q9NX78 707 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 STK17AQ9UEE5 414 aa14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 PACSIN2Q9UNF0 486 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-205ENST00000466780 NAB2Q15742 525 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 NAA35Q5VZE5 725 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 KCNK18Q7Z418 384 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 PRPF38AQ8NAV1 312 aaKnown RBP14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 TANGO6Q9C0B7 1094 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 EPN3Q9H201 632 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 BIN2Q9UBW5 565 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 CCDC88AQ3V6T2 1871 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 EDIL3O43854 480 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 NR1D1P20393 614 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 RASA1P20936 1047 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 DZIP1Q86YF9 867 aaKnown RBP14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 LZTS2Q9BRK4 669 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 CAPN7Q9Y6W3 813 aa14.33□□□□□ -0.12
PDZRN3-205ENST00000466780 MEFVO15553 781 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 CLSTN1O94985 981 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 RNASE9P60153 205 aaKnown RBP14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 PTGISQ16647 500 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 SLC9C1Q4G0N8 1177 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 FAM83BQ5T0W9 1011 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 MEI1Q5TIA1 1274 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 ZNF444Q8N0Y2 327 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 PAGR1Q9BTK6 254 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 CEP72Q9P209 647 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 PCDHGC5Q9Y5F6 944 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 POTEMA6NI47 508 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 MYO1FO00160 1098 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 SLC37A4O43826 429 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 SERPING1P05155 500 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 GNA11P29992 359 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 CDC37Q16543 378 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 ZCWPW2Q504Y3 356 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 SFMBT2Q5VUG0 894 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 USP17L2Q6R6M4 530 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 ZNF473Q8WTR7 871 aaKnown RBP14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 RAD54LQ92698 747 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 DDX12PQ92771 950 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 ATP6V1G3Q96LB4 118 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 PACSIN1Q9BY11 444 aa14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 THRAP3Q9Y2W1 955 aaKnown RBP14.32□□□□□ -0.12
PDZRN3-205ENST00000466780 COL16A1Q07092 1604 aaPredicted RBP14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 GRID2IPA4D2P6 1211 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 RAD51CO43502 376 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 PPP1R37O75864 691 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 FSBPO95073 299 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 MYBP10242 640 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 SEC24CP53992 1094 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 RPS8P62241 208 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 OTUD6BQ8N6M0 293 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 TBC1D5Q92609 795 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 SYN2Q92777 582 aaPredicted RBP14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 GEMIN8Q9NWZ8 242 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 ATP6V0A2Q9Y487 856 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 A0A087X0T9 212 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 TDP2O95551 362 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 FAM228BP0C875 321 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 NT5C2P49902 561 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 POLR2FP61218 127 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 CALCRLQ16602 461 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 ARHGAP27Q6ZUM4 889 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 PIGSQ96S52 555 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 LSM14BQ9BX40 385 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 VAT1LQ9HCJ6 419 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 RIC8AQ9NPQ8 531 aa14.31□□□□□ -0.12
PDZRN3-205ENST00000466780 HSPA9P38646 679 aaKnown RBP14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 MDH1P40925 334 aaKnown RBP14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 ITGB3BPQ13352 177 aaPredicted RBP14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 REXO1Q8N1G1 1221 aaKnown RBP14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 CCDC24Q8N4L8 307 aa14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 C1orf131Q8NDD1 294 aaKnown RBP14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 WHAMMQ8TF30 809 aa14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 CDK5RAP3Q96JB5 506 aa14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 NCAPGQ9BPX3 1015 aa14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 KANSL2Q9H9L4 492 aa14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 COL4A3BPQ9Y5P4 624 aa14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 ROBO1Q9Y6N7 1651 aa14.3□□□□□ -0.12
PDZRN3-205ENST00000466780 KIAA0754O94854 1291 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms