RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 PUS7Q96PZ0 661 aaKnown RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 TARS2Q9BW92 718 aaKnown RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 CELF4Q9BZC1 486 aaKnown RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 C19orf44Q9H6X5 657 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 CAAP1Q9H8G2 361 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 IPPKQ9H8X2 491 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 TNFRSF12AQ9NP84 129 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 PCDH12Q9NPG4 1184 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 FAM53CQ9NYF3 392 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 IMPACTQ9P2X3 320 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 GULP1Q9UBP9 304 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 YBX2Q9Y2T7 364 aaKnown RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 TCRBV5S4A2TA0A5A2 114 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 C22orf46C9J442 243 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 FAM47E-STBD1D6RA91 191 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 ZNF561-AS1K7EIQ3 104 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 CBX4O00257 560 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 AMY2AP04746 511 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 PRKCAP17252 672 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 NCLP19338 710 aaKnown RBP2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 AMY2BP19961 511 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 GRK2P25098 689 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 GRK3P35626 688 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 SLC6A11P48066 632 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 YBX1P67809 324 aaKnown RBP2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 DHCR24Q15392 516 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 SLC14A2Q15849 920 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 MROH9Q5TGP6 573 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 CYP4F22Q6NT55 531 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 OTOP3Q7RTS5 596 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 AHI1Q8N157 1196 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 PPM1KQ8N3J5 372 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 NETO2Q8NC67 525 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 ZSCAN18Q8TBC5 510 aaPredicted RBP2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 SH3RF2Q8TEC5 729 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 CHAC2Q8WUX2 184 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 FBXW5Q969U6 566 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 TMEM169Q96HH4 297 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 ALG1Q9BT22 464 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 JAM3Q9BX67 310 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 CLDND1Q9NY35 253 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 CBLCQ9ULV8 474 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 TAF6LQ9Y6J9 622 aa2.76□□□□□ -1.97
NUCKS1-202ENST00000464938 HRKO00198 91 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 OPA1O60313 960 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 GLRX3O76003 335 aaKnown RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 F2P00734 622 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 FUCA1P04066 466 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 NTRK1P04629 796 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 CYBBP04839 570 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 DBHP09172 617 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 INHBBP09529 407 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 C1QTNF9P0C862 333 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 ZBTB48P10074 688 aaPredicted RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 RAC2P15153 192 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 BPIP17213 487 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 FPR2P25090 351 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 SOX5P35711 763 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 FLT3P36888 993 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 EPHA5P54756 1037 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 CYP4F8P98187 520 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 DSG1Q02413 1049 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 GPR19Q15760 415 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 SEPT7Q16181 437 aaKnown RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 MLANAQ16655 118 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 CFAP100Q494V2 611 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 TMEM177Q53S58 311 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 CREB3L3Q68CJ9 461 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 PKN3Q6P5Z2 889 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 HHIPL2Q6UWX4 724 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 UBE2R2Q712K3 238 aaPredicted RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 STRA8Q7Z7C7 330 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 DDX53Q86TM3 631 aaKnown RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 MTDHQ86UE4 582 aaKnown RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 TEX2Q8IWB9 1127 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 ZC3H7AQ8IWR0 971 aaKnown RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 RPUSD2Q8IZ73 545 aaKnown RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 IGSF22Q8N9C0 903 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 NUP43Q8NFH3 380 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 ABHD4Q8TB40 342 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 TRMT2BQ96GJ1 504 aaKnown RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 PPP1R16BQ96T49 567 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 FAM126AQ9BYI3 521 aaPredicted RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 RNF32Q9H0A6 362 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 EPB41L1Q9H4G0 881 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 SMURF1Q9HCE7 757 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 SLC6A20Q9NP91 592 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 CD320Q9NPF0 282 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 HSPBP1Q9NZL4 362 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 MARCH2Q9P0N8 246 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 SAMD15Q9P1V8 674 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 B4GALT6Q9UBX8 382 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 NOP58Q9Y2X3 529 aaKnown RBP2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 RWDD3Q9Y3V2 267 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 COL4A3BPQ9Y5P4 624 aa2.75□□□□□ -1.97
NUCKS1-202ENST00000464938 PHLDB1Q86UU1 1377 aa2.74□□□□□ -1.97
NUCKS1-202ENST00000464938 CCDC66A2RUB6 948 aa2.74□□□□□ -1.97
NUCKS1-202ENST00000464938 M0R2C6 588 aa2.74□□□□□ -1.97
NUCKS1-202ENST00000464938 GSTA4O15217 222 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms