RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 EEPD1Q7L9B9 569 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 FBXO16Q8IX29 292 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-210ENST00000449116 C4orf32Q8N8J7 132 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 RAET1EQ8TD07 263 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 SCAND2PQ9GZW5 306 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-210ENST00000449116 TMEM60Q9H2L4 133 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 ABHD16BQ9H3Z7 469 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 KCNMB3Q9NPA1 279 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 KCNH7Q9NS40 1196 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 MORC2Q9Y6X9 1032 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-210ENST00000449116 MSH4O15457 936 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 FIBPO43427 364 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 OR52Z1P0C646 297 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 ARP10275 920 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 ICAM3P32942 547 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 MFSD14CQ5VZR4 134 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 ETNPPLQ8TBG4 499 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 KCNG4Q8TDN1 519 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 PXYLP1Q8TE99 480 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 TRIB2Q92519 343 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 SPATA32Q96LK8 384 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 GBP4Q96PP9 640 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 MTMR9Q96QG7 549 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 KATNBL1Q9H079 304 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 AGO4Q9HCK5 861 aaKnown RBP16.57■□□□□ 0.24
SHANK2-210ENST00000449116 RCOR1Q9UKL0 485 aa16.57■□□□□ 0.24
SHANK2-210ENST00000449116 SPATA31C2B4DYI2 1134 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 SPTLC2O15270 562 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 ADCY3O60266 1144 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 MARCH6O60337 910 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 CYP2C19P33261 490 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 SEMA3FQ13275 785 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 ACVR2BQ13705 512 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 ARL6IP4Q66PJ3 421 aaKnown RBP16.56■□□□□ 0.24
SHANK2-210ENST00000449116 KCNV1Q6PIU1 500 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 SLFN12Q8IYM2 578 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 LEO1Q8WVC0 666 aaPredicted RBP16.56■□□□□ 0.24
SHANK2-210ENST00000449116 HAS1Q92839 578 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 SLC5A5Q92911 643 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 FAM20AQ96MK3 541 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 ZNF577Q9BSK1 485 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 NRBP1Q9UHY1 535 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 ZHX1Q9UKY1 873 aaPredicted RBP16.56■□□□□ 0.24
SHANK2-210ENST00000449116 MRVI1Q9Y6F6 885 aa16.56■□□□□ 0.24
SHANK2-210ENST00000449116 RBM47A0AV96 593 aaKnown RBP16.55■□□□□ 0.24
SHANK2-210ENST00000449116 PPP6R2O75170 966 aa16.55■□□□□ 0.24
SHANK2-210ENST00000449116 TGFB3P10600 412 aa16.55■□□□□ 0.24
SHANK2-210ENST00000449116 MARCKSP29966 332 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-210ENST00000449116 PRPHP41219 470 aa16.55■□□□□ 0.24
SHANK2-210ENST00000449116 LBX1P52954 281 aa16.55■□□□□ 0.24
SHANK2-210ENST00000449116 TTLL4Q14679 1199 aa16.55■□□□□ 0.24
SHANK2-210ENST00000449116 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
SHANK2-210ENST00000449116 SCFD2Q8WU76 684 aa16.55■□□□□ 0.24
SHANK2-210ENST00000449116 GDPD2Q9HCC8 539 aa16.55■□□□□ 0.24
SHANK2-210ENST00000449116 MCM3APO60318 1980 aa16.55■□□□□ 0.24
SHANK2-210ENST00000449116 IPO5O00410 1097 aaKnown RBP16.54■□□□□ 0.24
SHANK2-210ENST00000449116 HMGCRP04035 888 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 ELNP15502 786 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 TXKP42681 527 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 CSPP1Q1MSJ5 1256 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 DTHD1Q6ZMT9 781 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 SLAIN1Q8ND83 568 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 RIT2Q99578 217 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 SENP7Q9BQF6 1050 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 PDGFCQ9NRA1 345 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 TBC1D22BQ9NU19 505 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 PKD2L1Q9P0L9 805 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 DDX41Q9UJV9 622 aaKnown RBP16.54■□□□□ 0.24
SHANK2-210ENST00000449116 PTPN22Q9Y2R2 807 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 SRPRBQ9Y5M8 271 aaKnown RBP16.54■□□□□ 0.24
SHANK2-210ENST00000449116 PTCH2Q9Y6C5 1203 aa16.54■□□□□ 0.24
SHANK2-210ENST00000449116 ELP1O95163 1332 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 GAS7O60861 476 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 ATP9AO75110 1047 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-210ENST00000449116 KCNA2P16389 499 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 UBA1P22314 1058 aaKnown RBP16.53■□□□□ 0.24
SHANK2-210ENST00000449116 ITGB3BPQ13352 177 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-210ENST00000449116 TMEM266Q2M3C6 531 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 PRAMEF19Q5SWL8 479 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 LRCH2Q5VUJ6 765 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 CCDC62Q6P9F0 684 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 KRI1Q8N9T8 703 aaKnown RBP16.53■□□□□ 0.24
SHANK2-210ENST00000449116 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-210ENST00000449116 GJA10Q969M2 543 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 UIMC1Q96RL1 719 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 SDF4Q9BRK5 362 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 TEKT3Q9BXF9 490 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 TTC12Q9H892 705 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-210ENST00000449116 FBXO2Q9UK22 296 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-210ENST00000449116 TCHHQ07283 1943 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 KIAA1217Q5T5P2 1943 aa16.53■□□□□ 0.24
SHANK2-210ENST00000449116 NFASCO94856 1347 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 VWA3AA6NCI4 1184 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 DHX15O43143 795 aaKnown RBP16.52■□□□□ 0.24
SHANK2-210ENST00000449116 PSMD10O75832 226 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 ARIH2O95376 493 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 TXNP10599 105 aaKnown RBP16.52■□□□□ 0.24
SHANK2-210ENST00000449116 CYBAP13498 195 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms