RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 PDIA5Q14554 519 aa25.98■■□□□ 1.75
CPSF4-204ENST00000436336 NLRX1Q86UT6 975 aa25.98■■□□□ 1.75
CPSF4-204ENST00000436336 INPP4AQ96PE3 977 aaPredicted RBP25.98■■□□□ 1.75
CPSF4-204ENST00000436336 WDR11Q9BZH6 1224 aa25.98■■□□□ 1.75
CPSF4-204ENST00000436336 ARP10275 920 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 ZNF792Q3KQV3 632 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 ENGASEQ8NFI3 743 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 SYMPKQ92797 1274 aaKnown RBP25.97■■□□□ 1.75
CPSF4-204ENST00000436336 SLC5A5Q92911 643 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 GPRASP2Q96D09 838 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 KCNH7Q9NS40 1196 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 MAFGO15525 162 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 EIF3JO75822 258 aaKnown RBP25.97■■□□□ 1.75
CPSF4-204ENST00000436336 NDUFA8P51970 172 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 PDE4DQ08499 809 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 GJA10Q969M2 543 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 ZNF577Q9BSK1 485 aa25.97■■□□□ 1.75
CPSF4-204ENST00000436336 COBLO75128 1261 aa25.96■■□□□ 1.75
CPSF4-204ENST00000436336 NR1I2O75469 434 aa25.96■■□□□ 1.75
CPSF4-204ENST00000436336 SNW1Q13573 536 aaKnown RBP25.96■■□□□ 1.75
CPSF4-204ENST00000436336 GNPTABQ3T906 1256 aa25.96■■□□□ 1.75
CPSF4-204ENST00000436336 USP49Q70CQ1 688 aa25.96■■□□□ 1.75
CPSF4-204ENST00000436336 EPSTI1Q96J88 318 aa25.96■■□□□ 1.75
CPSF4-204ENST00000436336 DIS3Q9Y2L1 958 aaKnown RBP25.96■■□□□ 1.75
CPSF4-204ENST00000436336 ZNF467Q7Z7K2 595 aaPredicted RBP25.95■■□□□ 1.74
CPSF4-204ENST00000436336 DPP9Q86TI2 863 aa25.95■■□□□ 1.74
CPSF4-204ENST00000436336 FMR1NBQ8N0W7 255 aaPredicted RBP25.95■■□□□ 1.74
CPSF4-204ENST00000436336 MORC4Q8TE76 937 aa25.95■■□□□ 1.74
CPSF4-204ENST00000436336 CDHR1Q96JP9 859 aa25.95■■□□□ 1.74
CPSF4-204ENST00000436336 DACT1Q9NYF0 836 aa25.95■■□□□ 1.74
CPSF4-204ENST00000436336 LRWD1Q9UFC0 647 aa25.95■■□□□ 1.74
CPSF4-204ENST00000436336 KCNH3Q9ULD8 1083 aa25.95■■□□□ 1.74
CPSF4-204ENST00000436336 ASB14A6NK59 587 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 IPO5O00410 1097 aaKnown RBP25.94■■□□□ 1.74
CPSF4-204ENST00000436336 TXLNAP40222 546 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 SYKP43405 635 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 UIMC1Q96RL1 719 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 AGO4Q9HCK5 861 aaKnown RBP25.94■■□□□ 1.74
CPSF4-204ENST00000436336 DDX19AQ9NUU7 478 aaKnown RBP25.94■■□□□ 1.74
CPSF4-204ENST00000436336 SLC5A4Q9NY91 659 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 PSMD10O75832 226 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 RGS20O76081 388 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 MORN1Q5T089 497 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 LRCH2Q5VUJ6 765 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 SYAP1Q96A49 352 aaPredicted RBP25.94■■□□□ 1.74
CPSF4-204ENST00000436336 RIT2Q99578 217 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 CCSER1Q9C0I3 900 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 RNF186Q9NXI6 227 aa25.94■■□□□ 1.74
CPSF4-204ENST00000436336 DOCK5Q9H7D0 1870 aa25.93■■□□□ 1.74
CPSF4-204ENST00000436336 ZSWIM8A7E2V4 1837 aa25.93■■□□□ 1.74
CPSF4-204ENST00000436336 POTEMA6NI47 508 aa25.93■■□□□ 1.74
CPSF4-204ENST00000436336 TBC1D8O95759 1140 aa25.93■■□□□ 1.74
CPSF4-204ENST00000436336 UBA7P41226 1012 aa25.93■■□□□ 1.74
CPSF4-204ENST00000436336 SPIRE1Q08AE8 756 aa25.93■■□□□ 1.74
CPSF4-204ENST00000436336 CAVIN1Q6NZI2 390 aaKnown RBP25.93■■□□□ 1.74
CPSF4-204ENST00000436336 VAV3Q9UKW4 847 aa25.93■■□□□ 1.74
CPSF4-204ENST00000436336 PP2D1A8MPX8 630 aa25.92■■□□□ 1.74
CPSF4-204ENST00000436336 GAS7O60861 476 aa25.92■■□□□ 1.74
CPSF4-204ENST00000436336 TEKT3Q9BXF9 490 aa25.92■■□□□ 1.74
CPSF4-204ENST00000436336 TNPO2O14787 897 aaKnown RBP25.91■■□□□ 1.74
CPSF4-204ENST00000436336 KINO60870 393 aaKnown RBP25.91■■□□□ 1.74
CPSF4-204ENST00000436336 TRPA1O75762 1119 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 ZNF202O95125 648 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 HSPA6P17066 643 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 CDC25AP30304 524 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 ICAM3P32942 547 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 MAP2K5Q13163 448 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 PYM1Q9BRP8 204 aaKnown RBP25.91■■□□□ 1.74
CPSF4-204ENST00000436336 TBC1D22BQ9NU19 505 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 TMEM63CQ9P1W3 806 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 SPATA31C2B4DYI2 1134 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 LACTBP83111 547 aaPredicted RBP25.91■■□□□ 1.74
CPSF4-204ENST00000436336 SEMA3FQ13275 785 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 PPP2R5CQ13362 524 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 OTOP1Q7RTM1 612 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 CABP7Q86V35 215 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 SOCS4Q8WXH5 440 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 NUDT12Q9BQG2 462 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 STK24Q9Y6E0 443 aa25.91■■□□□ 1.74
CPSF4-204ENST00000436336 ECM2O94769 699 aaPredicted RBP25.9■■□□□ 1.74
CPSF4-204ENST00000436336 FCGRTP55899 365 aa25.9■■□□□ 1.74
CPSF4-204ENST00000436336 MAMDC4Q6UXC1 1216 aa25.9■■□□□ 1.74
CPSF4-204ENST00000436336 ARMCX2Q7L311 632 aa25.9■■□□□ 1.74
CPSF4-204ENST00000436336 MAML3Q96JK9 1138 aa25.9■■□□□ 1.74
CPSF4-204ENST00000436336 TIGD1Q96MW7 591 aa25.9■■□□□ 1.74
CPSF4-204ENST00000436336 CCDC39Q9UFE4 941 aa25.9■■□□□ 1.74
CPSF4-204ENST00000436336 WDR81Q562E7 1941 aa25.89■■□□□ 1.74
CPSF4-204ENST00000436336 POLR2DO15514 142 aaKnown RBP25.89■■□□□ 1.74
CPSF4-204ENST00000436336 DHX15O43143 795 aaKnown RBP25.89■■□□□ 1.74
CPSF4-204ENST00000436336 HOXC6P09630 235 aa25.89■■□□□ 1.74
CPSF4-204ENST00000436336 ITGB3BPQ13352 177 aaPredicted RBP25.89■■□□□ 1.74
CPSF4-204ENST00000436336 CCDC183Q5T5S1 534 aa25.89■■□□□ 1.74
CPSF4-204ENST00000436336 KRT79Q5XKE5 535 aa25.89■■□□□ 1.74
CPSF4-204ENST00000436336 USP6NLQ92738 828 aa25.89■■□□□ 1.74
CPSF4-204ENST00000436336 PKD2L1Q9P0L9 805 aa25.89■■□□□ 1.74
CPSF4-204ENST00000436336 ATP9AO75110 1047 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 CTGFP29279 349 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 SP3Q02447 781 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 NCAPH2Q6IBW4 605 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 B3GNT9Q6UX72 402 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms