RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 USP17L11C9JVI0 530 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 USP17L18D6R9N7 530 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 USP17L22D6RA61 530 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 USP17L17D6RBQ6 530 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 USP17L19D6RCP7 530 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 USP17L20D6RJB6 530 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 MPHOSPH10O00566 681 aaKnown RBP15.9■□□□□ 0.14
ERCC3-202ENST00000426778 RPS6KA4O75676 772 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 KRT14P02533 472 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 CCT5P48643 541 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 USP17L24Q0WX57 530 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 RAPGEF1Q13905 1077 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 USP17L6PQ6QN14 398 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 FAM76AQ8TAV0 307 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 IVLP07476 585 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 GLI1P08151 1106 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 ACTN1P12814 892 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 RFC4P35249 363 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 GSTO1P78417 241 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 TMEM266Q2M3C6 531 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 FAM133AQ8N9E0 248 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 TBC1D5Q92609 795 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 C8orf37Q96NL8 207 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 ADAMTS1Q9UHI8 967 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 FAM184BQ9ULE4 1060 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 NFU1Q9UMS0 254 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 SAMM50Q9Y512 469 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 PALMO75781 387 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 TUBBP07437 444 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 CARSP49589 748 aaKnown RBP15.89■□□□□ 0.13
ERCC3-202ENST00000426778 RHBDL3P58872 404 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 COASYQ13057 564 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 GRAPQ13588 217 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 KLHDC7AQ5VTJ3 777 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 HGSNATQ68CP4 663 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 GRAPLQ8TC17 118 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-202ENST00000426778 ALS2CR12Q96Q35 445 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 VIPAS39Q9H9C1 493 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 KIAA1024Q9UPX6 916 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 HYOU1Q9Y4L1 999 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 ROBO3Q96MS0 1386 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 KDM4FA0A1W2PPD8 638 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 A0A1W2PQJ5 194 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 POTEB3A0JP26 581 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 POTECB2RU33 542 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 C6orf229H3BNL8 230 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 PPP4CP60510 307 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 EHHADHQ08426 723 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 C8orf74Q6P047 294 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 PDXDC1Q6P996 788 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 POTEBQ6S5H4 581 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 SLC30A10Q6XR72 485 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 CNBD1Q8NA66 436 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 TSGA10Q9BZW7 698 aa15.89■□□□□ 0.13
ERCC3-202ENST00000426778 MEIS1O00470 390 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 LDHCP07864 332 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 KLRC1P26715 233 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 SCNN1DP51172 638 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 GTF2IP78347 998 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 FAM83BQ5T0W9 1011 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 CCDC70Q6NSX1 233 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 HAS1Q92839 578 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 RPGRIP1Q96KN7 1286 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 MAGEF1Q9HAY2 307 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 PANK4Q9NVE7 773 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 DDX25Q9UHL0 483 aaKnown RBP15.88■□□□□ 0.13
ERCC3-202ENST00000426778 THRAP3Q9Y2W1 955 aaKnown RBP15.88■□□□□ 0.13
ERCC3-202ENST00000426778 TNRC6CQ9HCJ0 1690 aaKnown RBP15.88■□□□□ 0.13
ERCC3-202ENST00000426778 NAV1Q8NEY1 1877 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 DDX60LQ5H9U9 1706 aaKnown RBP15.88■□□□□ 0.13
ERCC3-202ENST00000426778 USP17L10C9JJH3 530 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 NOL4O94818 638 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 MCM3P25205 808 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 GUCY2DQ02846 1103 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 ADGRF4Q8IZF3 695 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 MYOCDQ8IZQ8 938 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
ERCC3-202ENST00000426778 GUF1Q8N442 669 aaKnown RBP15.88■□□□□ 0.13
ERCC3-202ENST00000426778 LZTS2Q9BRK4 669 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 MSL3Q8N5Y2 521 aaKnown RBP15.88■□□□□ 0.13
ERCC3-202ENST00000426778 EPB41L5Q9HCM4 733 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 DDX4Q9NQI0 724 aaKnown RBP15.88■□□□□ 0.13
ERCC3-202ENST00000426778 STIM2Q9P246 746 aa15.88■□□□□ 0.13
ERCC3-202ENST00000426778 WNK3Q9BYP7 1800 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 A0A087X0T9 212 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 FAM228BP0C875 321 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 PDCLQ13371 301 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 TTMPQ5BVD1 217 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 HERC4Q5GLZ8 1057 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-202ENST00000426778 FIGNQ5HY92 759 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 KLHL7Q8IXQ5 586 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 RPGRQ92834 1020 aaKnown RBP15.87■□□□□ 0.13
ERCC3-202ENST00000426778 DNAJC19Q96DA6 116 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 KRT12Q99456 494 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 IKZF4Q9H2S9 585 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 JMJD4Q9H9V9 463 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 PAFAH1B1P43034 410 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 CACNB3P54284 484 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 GNGT1P63211 74 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 FAM26FQ5R3K3 315 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms