RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 GOLGA6L10A6NI86 522 aa14.86□□□□□ -0.03
LRCH3-203ENST00000425562 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
LRCH3-203ENST00000425562 PAK2Q13177 524 aa14.86□□□□□ -0.03
LRCH3-203ENST00000425562 TRIM9Q9C026 710 aa14.86□□□□□ -0.03
LRCH3-203ENST00000425562 BSDC1Q9NW68 430 aaPredicted RBP14.86□□□□□ -0.03
LRCH3-203ENST00000425562 ARAP2Q8WZ64 1704 aa14.86□□□□□ -0.03
LRCH3-203ENST00000425562 RHOBTB3O94955 611 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 TXKP42681 527 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 UBE4AQ14139 1066 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 PPP2R5AQ15172 486 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 TBC1D5Q92609 795 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 NUP58Q9BVL2 599 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 BRIP1Q9BX63 1249 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 OSBPL7Q9BZF2 842 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 CRNKL1Q9BZJ0 848 aaKnown RBP14.85□□□□□ -0.03
LRCH3-203ENST00000425562 NOVA2Q9UNW9 492 aaKnown RBP14.85□□□□□ -0.03
LRCH3-203ENST00000425562 CACNA1SQ13698 1873 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 FSBPO95073 299 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 HIBADHP31937 336 aaKnown RBP14.85□□□□□ -0.03
LRCH3-203ENST00000425562 CTNNA1P35221 906 aaKnown RBP14.85□□□□□ -0.03
LRCH3-203ENST00000425562 POLR2FP61218 127 aaKnown RBP14.85□□□□□ -0.03
LRCH3-203ENST00000425562 RAPGEF1Q13905 1077 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 NBPF9Q3BBW0 867 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 KDM7AQ6ZMT4 941 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 DZIP1Q86YF9 867 aaKnown RBP14.85□□□□□ -0.03
LRCH3-203ENST00000425562 DDX47Q9H0S4 455 aaKnown RBP14.85□□□□□ -0.03
LRCH3-203ENST00000425562 DPH5Q9H2P9 285 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 DDX20Q9UHI6 824 aaKnown RBP14.85□□□□□ -0.03
LRCH3-203ENST00000425562 ZNF652Q9Y2D9 606 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 DUOX1Q9NRD9 1551 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 BCL9LQ86UU0 1499 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 NHSL1Q5SYE7 1610 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 CHUKO15111 745 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 KIAA0753Q2KHM9 967 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 VWA3BQ502W6 1294 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 RCSD1Q6JBY9 416 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 MICALCLQ6ZW33 695 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 NELFCDQ8IXH7 590 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 NEUROG2Q9H2A3 272 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 VCPKMTQ9H867 229 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 CNOT8Q9UFF9 292 aaKnown RBP14.85□□□□□ -0.03
LRCH3-203ENST00000425562 BAIAP2L1Q9UHR4 511 aa14.85□□□□□ -0.03
LRCH3-203ENST00000425562 CEP104O60308 925 aa14.84□□□□□ -0.03
LRCH3-203ENST00000425562 NEBLO76041 1014 aa14.84□□□□□ -0.03
LRCH3-203ENST00000425562 ELF1P32519 619 aa14.84□□□□□ -0.03
LRCH3-203ENST00000425562 RPS8P62241 208 aaKnown RBP14.84□□□□□ -0.03
LRCH3-203ENST00000425562 PFKFB3Q16875 520 aaPredicted RBP14.84□□□□□ -0.03
LRCH3-203ENST00000425562 IL17RBQ9NRM6 502 aa14.84□□□□□ -0.03
LRCH3-203ENST00000425562 TMCO5BA8MYB1 307 aa14.84□□□□□ -0.03
LRCH3-203ENST00000425562 COPB2P35606 906 aa14.84□□□□□ -0.03
LRCH3-203ENST00000425562 ERVK-9P63128 1117 aa14.84□□□□□ -0.03
LRCH3-203ENST00000425562 ITGB3BPQ13352 177 aaPredicted RBP14.84□□□□□ -0.03
LRCH3-203ENST00000425562 PNMA1Q8ND90 353 aa14.84□□□□□ -0.03
LRCH3-203ENST00000425562 KBTBD4Q9NVX7 518 aa14.84□□□□□ -0.03
LRCH3-203ENST00000425562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.84□□□□□ -0.03
LRCH3-203ENST00000425562 TLDC2A0PJX2 215 aa14.83□□□□□ -0.03
LRCH3-203ENST00000425562 HSD17B3P37058 310 aa14.83□□□□□ -0.03
LRCH3-203ENST00000425562 NAA25Q14CX7 972 aa14.83□□□□□ -0.03
LRCH3-203ENST00000425562 FAM228AQ86W67 206 aa14.83□□□□□ -0.03
LRCH3-203ENST00000425562 AMIGO3Q86WK7 504 aa14.83□□□□□ -0.03
LRCH3-203ENST00000425562 NBPF5PQ86XG9 351 aaPredicted RBP14.83□□□□□ -0.03
LRCH3-203ENST00000425562 FAM133AQ8N9E0 248 aa14.83□□□□□ -0.03
LRCH3-203ENST00000425562 SH3RF3Q8TEJ3 882 aaPredicted RBP14.83□□□□□ -0.03
LRCH3-203ENST00000425562 CAVIN3Q969G5 261 aa14.83□□□□□ -0.03
LRCH3-203ENST00000425562 CELF4Q9BZC1 486 aaKnown RBP14.83□□□□□ -0.03
LRCH3-203ENST00000425562 MKNK2Q9HBH9 465 aa14.83□□□□□ -0.03
LRCH3-203ENST00000425562 TCP11L1Q9NUJ3 509 aa14.83□□□□□ -0.03
LRCH3-203ENST00000425562 GCOM1H8Y6P7 765 aaPredicted RBP14.83□□□□□ -0.04
LRCH3-203ENST00000425562 DDAH1O94760 285 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 FAM107AO95990 144 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 MYZAPP0CAP1 466 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 CALM1P0DP23 149 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 CALM2P0DP24 149 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 CALM3P0DP25 149 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 EPB41P11171 864 aaKnown RBP14.83□□□□□ -0.04
LRCH3-203ENST00000425562 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.04
LRCH3-203ENST00000425562 NEDD9Q14511 834 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 FAM98CQ17RN3 349 aaKnown RBP14.83□□□□□ -0.04
LRCH3-203ENST00000425562 SLC35G1Q2M3R5 365 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 CYB5D1Q6P9G0 228 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 CPLX4Q7Z7G2 160 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 ZHX3Q9H4I2 956 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 DONSONQ9NYP3 566 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 SIK3Q9Y2K2 1263 aa14.83□□□□□ -0.04
LRCH3-203ENST00000425562 CLNS1AP54105 237 aaKnown RBP14.82□□□□□ -0.04
LRCH3-203ENST00000425562 MAGOHP61326 146 aaKnown RBP14.82□□□□□ -0.04
LRCH3-203ENST00000425562 ACCSLQ4AC99 568 aa14.82□□□□□ -0.04
LRCH3-203ENST00000425562 PNMA8AQ86V59 439 aaPredicted RBP14.82□□□□□ -0.04
LRCH3-203ENST00000425562 MAPKAPK5Q8IW41 473 aa14.82□□□□□ -0.04
LRCH3-203ENST00000425562 TGFBRAP1Q8WUH2 860 aa14.82□□□□□ -0.04
LRCH3-203ENST00000425562 MAGOHBQ96A72 148 aaKnown RBP14.82□□□□□ -0.04
LRCH3-203ENST00000425562 DHTKD1Q96HY7 919 aaPredicted RBP14.82□□□□□ -0.04
LRCH3-203ENST00000425562 TPX2Q9ULW0 747 aaKnown RBP14.82□□□□□ -0.04
LRCH3-203ENST00000425562 PCDHA6Q9UN73 950 aa14.82□□□□□ -0.04
LRCH3-203ENST00000425562 PCDHA8Q9Y5H6 950 aa14.82□□□□□ -0.04
LRCH3-203ENST00000425562 PLCH1Q4KWH8 1693 aa14.82□□□□□ -0.04
LRCH3-203ENST00000425562 A0A087X0T9 212 aa14.82□□□□□ -0.04
LRCH3-203ENST00000425562 BICDL2A1A5D9 508 aa14.82□□□□□ -0.04
LRCH3-203ENST00000425562 FAM228BP0C875 321 aa14.82□□□□□ -0.04
LRCH3-203ENST00000425562 ITGA4P13612 1032 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms